Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv20A0A0B4J1H5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.49■□□□□ 0.39
Trbv20A0A0B4J1H5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv20A0A0B4J1H5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trbv20A0A0B4J1H5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trbv20A0A0B4J1H5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.49■□□□□ 0.39
Trbv20A0A0B4J1H5 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.49■□□□□ 0.39
Trbv20A0A0B4J1H5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv20A0A0B4J1H5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv20A0A0B4J1H5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trbv20A0A0B4J1H5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv20A0A0B4J1H5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Trbv20A0A0B4J1H5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv20A0A0B4J1H5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv20A0A0B4J1H5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv20A0A0B4J1H5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trbv20A0A0B4J1H5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv20A0A0B4J1H5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv20A0A0B4J1H5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Trbv20A0A0B4J1H5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv20A0A0B4J1H5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trbv20A0A0B4J1H5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv20A0A0B4J1H5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv20A0A0B4J1H5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv20A0A0B4J1H5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv20A0A0B4J1H5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.47■□□□□ 0.39
Trbv20A0A0B4J1H5 Gm10420-201ENSMUST00000121713 882 ntBASIC17.47■□□□□ 0.39
Trbv20A0A0B4J1H5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trbv20A0A0B4J1H5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv20A0A0B4J1H5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv20A0A0B4J1H5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trbv20A0A0B4J1H5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Trbv20A0A0B4J1H5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv20A0A0B4J1H5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv20A0A0B4J1H5 BC021767-201ENSMUST00000126387 1716 ntBASIC17.47■□□□□ 0.39
Trbv20A0A0B4J1H5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv20A0A0B4J1H5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.47■□□□□ 0.39
Trbv20A0A0B4J1H5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trbv20A0A0B4J1H5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv20A0A0B4J1H5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trbv20A0A0B4J1H5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trbv20A0A0B4J1H5 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.46■□□□□ 0.39
Trbv20A0A0B4J1H5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv20A0A0B4J1H5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv20A0A0B4J1H5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv20A0A0B4J1H5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv20A0A0B4J1H5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.45■□□□□ 0.38
Trbv20A0A0B4J1H5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv20A0A0B4J1H5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trbv20A0A0B4J1H5 Mir6236-201ENSMUST00000184437 123 ntBASIC17.45■□□□□ 0.38
Trbv20A0A0B4J1H5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv20A0A0B4J1H5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv20A0A0B4J1H5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv20A0A0B4J1H5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.45■□□□□ 0.38
Trbv20A0A0B4J1H5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.45■□□□□ 0.38
Trbv20A0A0B4J1H5 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.45■□□□□ 0.38
Trbv20A0A0B4J1H5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv20A0A0B4J1H5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv20A0A0B4J1H5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv20A0A0B4J1H5 Rarb-207ENSMUST00000225921 2756 ntBASIC17.45■□□□□ 0.38
Trbv20A0A0B4J1H5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.45■□□□□ 0.38
Trbv20A0A0B4J1H5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trbv20A0A0B4J1H5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv20A0A0B4J1H5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv20A0A0B4J1H5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv20A0A0B4J1H5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv20A0A0B4J1H5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trbv20A0A0B4J1H5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv20A0A0B4J1H5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv20A0A0B4J1H5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv20A0A0B4J1H5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv20A0A0B4J1H5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv20A0A0B4J1H5 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv20A0A0B4J1H5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv20A0A0B4J1H5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv20A0A0B4J1H5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trbv20A0A0B4J1H5 Gm7143-201ENSMUST00000222811 859 ntBASIC17.43■□□□□ 0.38
Trbv20A0A0B4J1H5 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.43■□□□□ 0.38
Trbv20A0A0B4J1H5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv20A0A0B4J1H5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.43■□□□□ 0.38
Trbv20A0A0B4J1H5 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.43■□□□□ 0.38
Trbv20A0A0B4J1H5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv20A0A0B4J1H5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.43■□□□□ 0.38
Trbv20A0A0B4J1H5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv20A0A0B4J1H5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.42■□□□□ 0.38
Trbv20A0A0B4J1H5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv20A0A0B4J1H5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv20A0A0B4J1H5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv20A0A0B4J1H5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv20A0A0B4J1H5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv20A0A0B4J1H5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv20A0A0B4J1H5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Trbv20A0A0B4J1H5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.42■□□□□ 0.38
Trbv20A0A0B4J1H5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv20A0A0B4J1H5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv20A0A0B4J1H5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv20A0A0B4J1H5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Trbv20A0A0B4J1H5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv20A0A0B4J1H5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv20A0A0B4J1H5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms