Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.33■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.32■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.31■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.31■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv12-1A0A0B4J1H0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.3■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.3■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.3■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv12-1A0A0B4J1H0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.28■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv12-1A0A0B4J1H0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.28■□□□□ 0.36
Trbv12-1A0A0B4J1H0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.28■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.28■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Notumos-201ENSMUST00000151998 2659 ntBASIC17.27■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.27■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Gm27801-201ENSMUST00000184174 223 ntBASIC17.27■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.27■□□□□ 0.36
Trbv12-1A0A0B4J1H0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms