Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv3A0A0A6YYE2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv3A0A0A6YYE2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv3A0A0A6YYE2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv3A0A0A6YYE2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv3A0A0A6YYE2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trbv3A0A0A6YYE2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trbv3A0A0A6YYE2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv3A0A0A6YYE2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trbv3A0A0A6YYE2 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.05■□□□□ -0
Trbv3A0A0A6YYE2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trbv3A0A0A6YYE2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv3A0A0A6YYE2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv3A0A0A6YYE2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv3A0A0A6YYE2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv3A0A0A6YYE2 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.05■□□□□ -0
Trbv3A0A0A6YYE2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trbv3A0A0A6YYE2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trbv3A0A0A6YYE2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv3A0A0A6YYE2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv3A0A0A6YYE2 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.04■□□□□ -0
Trbv3A0A0A6YYE2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv3A0A0A6YYE2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv3A0A0A6YYE2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv3A0A0A6YYE2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trbv3A0A0A6YYE2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trbv3A0A0A6YYE2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.04■□□□□ -0
Trbv3A0A0A6YYE2 Gm14523-201ENSMUST00000117260 558 ntBASIC15.04■□□□□ -0
Trbv3A0A0A6YYE2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.04■□□□□ -0
Trbv3A0A0A6YYE2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trbv3A0A0A6YYE2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.04■□□□□ -0
Trbv3A0A0A6YYE2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.04■□□□□ -0
Trbv3A0A0A6YYE2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.04■□□□□ -0
Trbv3A0A0A6YYE2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv3A0A0A6YYE2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trbv3A0A0A6YYE2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trbv3A0A0A6YYE2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trbv3A0A0A6YYE2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv3A0A0A6YYE2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv3A0A0A6YYE2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trbv3A0A0A6YYE2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Trbv3A0A0A6YYE2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv3A0A0A6YYE2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv3A0A0A6YYE2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.03■□□□□ -0
Trbv3A0A0A6YYE2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv3A0A0A6YYE2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trbv3A0A0A6YYE2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trbv3A0A0A6YYE2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv3A0A0A6YYE2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trbv3A0A0A6YYE2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv3A0A0A6YYE2 Grk6-206ENSMUST00000224995 2971 ntBASIC15.03■□□□□ -0
Trbv3A0A0A6YYE2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trbv3A0A0A6YYE2 Rarb-207ENSMUST00000225921 2756 ntBASIC15.02■□□□□ -0
Trbv3A0A0A6YYE2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv3A0A0A6YYE2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trbv3A0A0A6YYE2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv3A0A0A6YYE2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv3A0A0A6YYE2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv3A0A0A6YYE2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trbv3A0A0A6YYE2 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.02■□□□□ -0
Trbv3A0A0A6YYE2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv3A0A0A6YYE2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv3A0A0A6YYE2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trbv3A0A0A6YYE2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv3A0A0A6YYE2 Mir6236-201ENSMUST00000184437 123 ntBASIC15.02■□□□□ -0
Trbv3A0A0A6YYE2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trbv3A0A0A6YYE2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv3A0A0A6YYE2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv3A0A0A6YYE2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv3A0A0A6YYE2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trbv3A0A0A6YYE2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv3A0A0A6YYE2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv3A0A0A6YYE2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.01□□□□□ -0.01
Trbv3A0A0A6YYE2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Trbv3A0A0A6YYE2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv3A0A0A6YYE2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.01□□□□□ -0.01
Trbv3A0A0A6YYE2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv3A0A0A6YYE2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.01□□□□□ -0.01
Trbv3A0A0A6YYE2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv3A0A0A6YYE2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv3A0A0A6YYE2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Trbv3A0A0A6YYE2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trbv3A0A0A6YYE2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.01□□□□□ -0.01
Trbv3A0A0A6YYE2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv3A0A0A6YYE2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv3A0A0A6YYE2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv3A0A0A6YYE2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trbv3A0A0A6YYE2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv3A0A0A6YYE2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv3A0A0A6YYE2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trbv3A0A0A6YYE2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv3A0A0A6YYE2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv3A0A0A6YYE2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Trbv3A0A0A6YYE2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trbv3A0A0A6YYE2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv3A0A0A6YYE2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv3A0A0A6YYE2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Trbv3A0A0A6YYE2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trbv3A0A0A6YYE2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv3A0A0A6YYE2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 153.1 ms