Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.27■□□□□ 0.2
Ighv3-4A0A0A6YXF1 Gm4968-201ENSMUST00000071458 858 ntBASIC16.27■□□□□ 0.2
Ighv3-4A0A0A6YXF1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.27■□□□□ 0.2
Ighv3-4A0A0A6YXF1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.27■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.27■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gm13146-201ENSMUST00000118508 780 ntBASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gm10653-202ENSMUST00000139570 835 ntBASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.25■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.25■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gm7290-201ENSMUST00000104990 617 ntBASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gm12918-201ENSMUST00000120234 636 ntBASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gm15710-201ENSMUST00000121821 636 ntBASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gm5075-201ENSMUST00000196916 622 ntBASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gm38205-201ENSMUST00000192243 258 ntBASIC16.23■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.23■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv3-4A0A0A6YXF1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.22■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ighv3-4A0A0A6YXF1 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.22■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.22■□□□□ 0.19
Ighv3-4A0A0A6YXF1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.22■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gm6365-201ENSMUST00000054711 744 ntBASIC16.22■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.21■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.21■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.21■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.21■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gm20760-201ENSMUST00000179197 648 ntBASIC16.21■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gm5408-201ENSMUST00000197998 747 ntBASIC16.21■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv3-4A0A0A6YXF1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ighv3-4A0A0A6YXF1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms