Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv23A0A0A6YWQ1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trbv23A0A0A6YWQ1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv23A0A0A6YWQ1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.74■□□□□ 0.27
Trbv23A0A0A6YWQ1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.74■□□□□ 0.27
Trbv23A0A0A6YWQ1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv23A0A0A6YWQ1 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.74■□□□□ 0.27
Trbv23A0A0A6YWQ1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv23A0A0A6YWQ1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv23A0A0A6YWQ1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv23A0A0A6YWQ1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv23A0A0A6YWQ1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv23A0A0A6YWQ1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv23A0A0A6YWQ1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trbv23A0A0A6YWQ1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv23A0A0A6YWQ1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trbv23A0A0A6YWQ1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv23A0A0A6YWQ1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv23A0A0A6YWQ1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv23A0A0A6YWQ1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.73■□□□□ 0.27
Trbv23A0A0A6YWQ1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv23A0A0A6YWQ1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.73■□□□□ 0.27
Trbv23A0A0A6YWQ1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.73■□□□□ 0.27
Trbv23A0A0A6YWQ1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trbv23A0A0A6YWQ1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv23A0A0A6YWQ1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv23A0A0A6YWQ1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv23A0A0A6YWQ1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Trbv23A0A0A6YWQ1 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.71■□□□□ 0.27
Trbv23A0A0A6YWQ1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trbv23A0A0A6YWQ1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv23A0A0A6YWQ1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv23A0A0A6YWQ1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv23A0A0A6YWQ1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv23A0A0A6YWQ1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv23A0A0A6YWQ1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv23A0A0A6YWQ1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trbv23A0A0A6YWQ1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Trbv23A0A0A6YWQ1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Trbv23A0A0A6YWQ1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trbv23A0A0A6YWQ1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv23A0A0A6YWQ1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv23A0A0A6YWQ1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv23A0A0A6YWQ1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv23A0A0A6YWQ1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv23A0A0A6YWQ1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv23A0A0A6YWQ1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv23A0A0A6YWQ1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trbv23A0A0A6YWQ1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.7■□□□□ 0.26
Trbv23A0A0A6YWQ1 Etf1-202ENSMUST00000180351 108 ntBASIC16.7■□□□□ 0.26
Trbv23A0A0A6YWQ1 Gm40881-201ENSMUST00000223397 166 ntBASIC16.7■□□□□ 0.26
Trbv23A0A0A6YWQ1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.7■□□□□ 0.26
Trbv23A0A0A6YWQ1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trbv23A0A0A6YWQ1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv23A0A0A6YWQ1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv23A0A0A6YWQ1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv23A0A0A6YWQ1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv23A0A0A6YWQ1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv23A0A0A6YWQ1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trbv23A0A0A6YWQ1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv23A0A0A6YWQ1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Trbv23A0A0A6YWQ1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv23A0A0A6YWQ1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv23A0A0A6YWQ1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.69■□□□□ 0.26
Trbv23A0A0A6YWQ1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms