Protein–RNA interactions for Protein: A0A0A6YW38

Gm28870, Predicted gene 28870, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28870A0A0A6YW38 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28870A0A0A6YW38 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28870A0A0A6YW38 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28870A0A0A6YW38 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28870A0A0A6YW38 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Gm28870A0A0A6YW38 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28870A0A0A6YW38 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28870A0A0A6YW38 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28870A0A0A6YW38 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28870A0A0A6YW38 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.89■□□□□ 0.29
Gm28870A0A0A6YW38 Gm43566-201ENSMUST00000196851 808 ntBASIC16.89■□□□□ 0.29
Gm28870A0A0A6YW38 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.89■□□□□ 0.29
Gm28870A0A0A6YW38 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28870A0A0A6YW38 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Gm28870A0A0A6YW38 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28870A0A0A6YW38 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28870A0A0A6YW38 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Gm28870A0A0A6YW38 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Gm28870A0A0A6YW38 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28870A0A0A6YW38 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28870A0A0A6YW38 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28870A0A0A6YW38 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.88■□□□□ 0.29
Gm28870A0A0A6YW38 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28870A0A0A6YW38 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Gm28870A0A0A6YW38 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28870A0A0A6YW38 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28870A0A0A6YW38 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.88■□□□□ 0.29
Gm28870A0A0A6YW38 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28870A0A0A6YW38 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28870A0A0A6YW38 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28870A0A0A6YW38 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.87■□□□□ 0.29
Gm28870A0A0A6YW38 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28870A0A0A6YW38 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28870A0A0A6YW38 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28870A0A0A6YW38 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Gm28870A0A0A6YW38 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Gm28870A0A0A6YW38 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Gm28870A0A0A6YW38 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28870A0A0A6YW38 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28870A0A0A6YW38 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28870A0A0A6YW38 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Gm28870A0A0A6YW38 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28870A0A0A6YW38 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
Gm28870A0A0A6YW38 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28870A0A0A6YW38 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28870A0A0A6YW38 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28870A0A0A6YW38 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28870A0A0A6YW38 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Gm28870A0A0A6YW38 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Gm28870A0A0A6YW38 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.86■□□□□ 0.29
Gm28870A0A0A6YW38 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28870A0A0A6YW38 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28870A0A0A6YW38 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28870A0A0A6YW38 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28870A0A0A6YW38 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Gm28870A0A0A6YW38 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28870A0A0A6YW38 Gm5921-201ENSMUST00000075898 882 ntBASIC16.85■□□□□ 0.29
Gm28870A0A0A6YW38 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28870A0A0A6YW38 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28870A0A0A6YW38 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.85■□□□□ 0.29
Gm28870A0A0A6YW38 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28870A0A0A6YW38 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28870A0A0A6YW38 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28870A0A0A6YW38 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28870A0A0A6YW38 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Gm28870A0A0A6YW38 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
Gm28870A0A0A6YW38 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.84■□□□□ 0.29
Gm28870A0A0A6YW38 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.84■□□□□ 0.29
Gm28870A0A0A6YW38 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.84■□□□□ 0.29
Gm28870A0A0A6YW38 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28870A0A0A6YW38 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28870A0A0A6YW38 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28870A0A0A6YW38 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
Gm28870A0A0A6YW38 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28870A0A0A6YW38 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Gm28870A0A0A6YW38 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Gm28870A0A0A6YW38 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28870A0A0A6YW38 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28870A0A0A6YW38 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28870A0A0A6YW38 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Gm28870A0A0A6YW38 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28870A0A0A6YW38 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm28870A0A0A6YW38 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28870A0A0A6YW38 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28870A0A0A6YW38 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28870A0A0A6YW38 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28870A0A0A6YW38 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.83■□□□□ 0.28
Gm28870A0A0A6YW38 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28870A0A0A6YW38 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28870A0A0A6YW38 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28870A0A0A6YW38 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28870A0A0A6YW38 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28870A0A0A6YW38 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.82■□□□□ 0.28
Gm28870A0A0A6YW38 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28870A0A0A6YW38 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Gm28870A0A0A6YW38 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28870A0A0A6YW38 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28870A0A0A6YW38 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28870A0A0A6YW38 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28870A0A0A6YW38 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms