Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-4A0A075B6B4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-4A0A075B6B4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-4A0A075B6B4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav6-4A0A075B6B4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav6-4A0A075B6B4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-4A0A075B6B4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Trav6-4A0A075B6B4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Trav6-4A0A075B6B4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Trav6-4A0A075B6B4 Gm45417-201ENSMUST00000209533 758 ntBASIC15.04■□□□□ -0
Trav6-4A0A075B6B4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-4A0A075B6B4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.04■□□□□ -0
Trav6-4A0A075B6B4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-4A0A075B6B4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-4A0A075B6B4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-4A0A075B6B4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-4A0A075B6B4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Gm8493-201ENSMUST00000196881 489 ntBASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-4A0A075B6B4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Trav6-4A0A075B6B4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav6-4A0A075B6B4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav6-4A0A075B6B4 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.02■□□□□ -0
Trav6-4A0A075B6B4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav6-4A0A075B6B4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6-4A0A075B6B4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav6-4A0A075B6B4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav6-4A0A075B6B4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.02■□□□□ -0
Trav6-4A0A075B6B4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav6-4A0A075B6B4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.02■□□□□ -0
Trav6-4A0A075B6B4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trav6-4A0A075B6B4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-4A0A075B6B4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-4A0A075B6B4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.02□□□□□ -0.01
Trav6-4A0A075B6B4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-4A0A075B6B4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trav6-4A0A075B6B4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-4A0A075B6B4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-4A0A075B6B4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-4A0A075B6B4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-4A0A075B6B4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-4A0A075B6B4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Trav6-4A0A075B6B4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-4A0A075B6B4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-4A0A075B6B4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-4A0A075B6B4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.01□□□□□ -0.01
Trav6-4A0A075B6B4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-4A0A075B6B4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-4A0A075B6B4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-4A0A075B6B4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-4A0A075B6B4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Dapk1-207ENSMUST00000226059 5009 ntBASIC15□□□□□ -0.01
Trav6-4A0A075B6B4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Trav6-4A0A075B6B4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-4A0A075B6B4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-4A0A075B6B4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav6-4A0A075B6B4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-4A0A075B6B4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-4A0A075B6B4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-4A0A075B6B4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-4A0A075B6B4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-4A0A075B6B4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-4A0A075B6B4 AA386476-201ENSMUST00000098781 1665 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms