Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav10nA0A075B622 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav10nA0A075B622 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav10nA0A075B622 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav10nA0A075B622 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav10nA0A075B622 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav10nA0A075B622 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trav10nA0A075B622 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.33■□□□□ 0.37
Trav10nA0A075B622 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav10nA0A075B622 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trav10nA0A075B622 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.33■□□□□ 0.36
Trav10nA0A075B622 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.33■□□□□ 0.36
Trav10nA0A075B622 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.33■□□□□ 0.36
Trav10nA0A075B622 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav10nA0A075B622 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav10nA0A075B622 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav10nA0A075B622 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav10nA0A075B622 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Trav10nA0A075B622 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav10nA0A075B622 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav10nA0A075B622 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trav10nA0A075B622 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav10nA0A075B622 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav10nA0A075B622 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav10nA0A075B622 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Trav10nA0A075B622 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.32■□□□□ 0.36
Trav10nA0A075B622 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav10nA0A075B622 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav10nA0A075B622 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav10nA0A075B622 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trav10nA0A075B622 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav10nA0A075B622 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav10nA0A075B622 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav10nA0A075B622 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav10nA0A075B622 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav10nA0A075B622 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav10nA0A075B622 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trav10nA0A075B622 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav10nA0A075B622 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav10nA0A075B622 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav10nA0A075B622 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav10nA0A075B622 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav10nA0A075B622 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav10nA0A075B622 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav10nA0A075B622 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav10nA0A075B622 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav10nA0A075B622 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav10nA0A075B622 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav10nA0A075B622 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav10nA0A075B622 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav10nA0A075B622 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav10nA0A075B622 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Trav10nA0A075B622 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav10nA0A075B622 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Trav10nA0A075B622 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav10nA0A075B622 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav10nA0A075B622 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav10nA0A075B622 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav10nA0A075B622 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trav10nA0A075B622 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trav10nA0A075B622 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav10nA0A075B622 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.29■□□□□ 0.36
Trav10nA0A075B622 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav10nA0A075B622 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav10nA0A075B622 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav10nA0A075B622 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Trav10nA0A075B622 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav10nA0A075B622 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav10nA0A075B622 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav10nA0A075B622 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav10nA0A075B622 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav10nA0A075B622 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav10nA0A075B622 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav10nA0A075B622 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav10nA0A075B622 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.28■□□□□ 0.36
Trav10nA0A075B622 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trav10nA0A075B622 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav10nA0A075B622 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trav10nA0A075B622 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trav10nA0A075B622 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav10nA0A075B622 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav10nA0A075B622 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trav10nA0A075B622 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav10nA0A075B622 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav10nA0A075B622 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav10nA0A075B622 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav10nA0A075B622 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Trav10nA0A075B622 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Trav10nA0A075B622 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav10nA0A075B622 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.27■□□□□ 0.36
Trav10nA0A075B622 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.27■□□□□ 0.36
Trav10nA0A075B622 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav10nA0A075B622 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav10nA0A075B622 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav10nA0A075B622 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trav10nA0A075B622 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trav10nA0A075B622 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav10nA0A075B622 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav10nA0A075B622 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trav10nA0A075B622 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms