Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-1A0A075B601 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.22■□□□□ 0.03
Trav9-1A0A075B601 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9-1A0A075B601 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9-1A0A075B601 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9-1A0A075B601 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9-1A0A075B601 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9-1A0A075B601 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9-1A0A075B601 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9-1A0A075B601 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9-1A0A075B601 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Trav9-1A0A075B601 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9-1A0A075B601 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Trav9-1A0A075B601 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9-1A0A075B601 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav9-1A0A075B601 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9-1A0A075B601 Gm14117-201ENSMUST00000122417 843 ntBASIC15.21■□□□□ 0.03
Trav9-1A0A075B601 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav9-1A0A075B601 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav9-1A0A075B601 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav9-1A0A075B601 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav9-1A0A075B601 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9-1A0A075B601 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav9-1A0A075B601 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9-1A0A075B601 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav9-1A0A075B601 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.2■□□□□ 0.02
Trav9-1A0A075B601 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9-1A0A075B601 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9-1A0A075B601 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav9-1A0A075B601 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav9-1A0A075B601 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.2■□□□□ 0.02
Trav9-1A0A075B601 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
Trav9-1A0A075B601 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9-1A0A075B601 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.2■□□□□ 0.02
Trav9-1A0A075B601 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9-1A0A075B601 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9-1A0A075B601 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9-1A0A075B601 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9-1A0A075B601 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9-1A0A075B601 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9-1A0A075B601 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9-1A0A075B601 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav9-1A0A075B601 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav9-1A0A075B601 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav9-1A0A075B601 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav9-1A0A075B601 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9-1A0A075B601 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9-1A0A075B601 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9-1A0A075B601 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9-1A0A075B601 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9-1A0A075B601 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav9-1A0A075B601 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.19■□□□□ 0.02
Trav9-1A0A075B601 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9-1A0A075B601 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9-1A0A075B601 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav9-1A0A075B601 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9-1A0A075B601 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav9-1A0A075B601 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav9-1A0A075B601 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
Trav9-1A0A075B601 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9-1A0A075B601 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9-1A0A075B601 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9-1A0A075B601 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9-1A0A075B601 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Trav9-1A0A075B601 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9-1A0A075B601 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9-1A0A075B601 Rps24-207ENSMUST00000224568 714 ntBASIC15.17■□□□□ 0.02
Trav9-1A0A075B601 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9-1A0A075B601 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9-1A0A075B601 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9-1A0A075B601 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9-1A0A075B601 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9-1A0A075B601 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav9-1A0A075B601 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav9-1A0A075B601 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Trav9-1A0A075B601 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9-1A0A075B601 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.16■□□□□ 0.02
Trav9-1A0A075B601 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9-1A0A075B601 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9-1A0A075B601 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9-1A0A075B601 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms