Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Trav6-1A0A075B5Z8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-1A0A075B5Z8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-1A0A075B5Z8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-1A0A075B5Z8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Trav6-1A0A075B5Z8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav6-1A0A075B5Z8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav6-1A0A075B5Z8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-1A0A075B5Z8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-1A0A075B5Z8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-1A0A075B5Z8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav6-1A0A075B5Z8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav6-1A0A075B5Z8 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.69■□□□□ 0.1
Trav6-1A0A075B5Z8 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.69■□□□□ 0.1
Trav6-1A0A075B5Z8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav6-1A0A075B5Z8 Gm9870-201ENSMUST00000063874 645 ntBASIC15.69■□□□□ 0.1
Trav6-1A0A075B5Z8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Trav6-1A0A075B5Z8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-1A0A075B5Z8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-1A0A075B5Z8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-1A0A075B5Z8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-1A0A075B5Z8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-1A0A075B5Z8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav6-1A0A075B5Z8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-1A0A075B5Z8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Trav6-1A0A075B5Z8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-1A0A075B5Z8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-1A0A075B5Z8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav6-1A0A075B5Z8 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.67■□□□□ 0.1
Trav6-1A0A075B5Z8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-1A0A075B5Z8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-1A0A075B5Z8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
Trav6-1A0A075B5Z8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-1A0A075B5Z8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-1A0A075B5Z8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
Trav6-1A0A075B5Z8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-1A0A075B5Z8 Cap2-205ENSMUST00000225824 1634 ntBASIC15.66■□□□□ 0.1
Trav6-1A0A075B5Z8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-1A0A075B5Z8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.66■□□□□ 0.1
Trav6-1A0A075B5Z8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav6-1A0A075B5Z8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-1A0A075B5Z8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-1A0A075B5Z8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-1A0A075B5Z8 AA386476-201ENSMUST00000098781 1665 ntBASIC15.66■□□□□ 0.1
Trav6-1A0A075B5Z8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav6-1A0A075B5Z8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-1A0A075B5Z8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-1A0A075B5Z8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-1A0A075B5Z8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-1A0A075B5Z8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-1A0A075B5Z8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav6-1A0A075B5Z8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-1A0A075B5Z8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-1A0A075B5Z8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav6-1A0A075B5Z8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-1A0A075B5Z8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.65■□□□□ 0.1
Trav6-1A0A075B5Z8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.65■□□□□ 0.1
Trav6-1A0A075B5Z8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-1A0A075B5Z8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-1A0A075B5Z8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-1A0A075B5Z8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Trav6-1A0A075B5Z8 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.65■□□□□ 0.1
Trav6-1A0A075B5Z8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-1A0A075B5Z8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-1A0A075B5Z8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Trav6-1A0A075B5Z8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Trav6-1A0A075B5Z8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Etf1-202ENSMUST00000180351 108 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms