Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav1A0A075B5Z4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav1A0A075B5Z4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav1A0A075B5Z4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav1A0A075B5Z4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Trav1A0A075B5Z4 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.18■□□□□ 0.5
Trav1A0A075B5Z4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.18■□□□□ 0.5
Trav1A0A075B5Z4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav1A0A075B5Z4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav1A0A075B5Z4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav1A0A075B5Z4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Trav1A0A075B5Z4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Trav1A0A075B5Z4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav1A0A075B5Z4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav1A0A075B5Z4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav1A0A075B5Z4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trav1A0A075B5Z4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav1A0A075B5Z4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav1A0A075B5Z4 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.17■□□□□ 0.5
Trav1A0A075B5Z4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav1A0A075B5Z4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav1A0A075B5Z4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav1A0A075B5Z4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trav1A0A075B5Z4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trav1A0A075B5Z4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trav1A0A075B5Z4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav1A0A075B5Z4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav1A0A075B5Z4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav1A0A075B5Z4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Trav1A0A075B5Z4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav1A0A075B5Z4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav1A0A075B5Z4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav1A0A075B5Z4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav1A0A075B5Z4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav1A0A075B5Z4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.16■□□□□ 0.5
Trav1A0A075B5Z4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav1A0A075B5Z4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav1A0A075B5Z4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav1A0A075B5Z4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav1A0A075B5Z4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav1A0A075B5Z4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav1A0A075B5Z4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav1A0A075B5Z4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trav1A0A075B5Z4 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.16■□□□□ 0.5
Trav1A0A075B5Z4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav1A0A075B5Z4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.15■□□□□ 0.5
Trav1A0A075B5Z4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav1A0A075B5Z4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav1A0A075B5Z4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav1A0A075B5Z4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav1A0A075B5Z4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.15■□□□□ 0.5
Trav1A0A075B5Z4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav1A0A075B5Z4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav1A0A075B5Z4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav1A0A075B5Z4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav1A0A075B5Z4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trav1A0A075B5Z4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.14■□□□□ 0.5
Trav1A0A075B5Z4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav1A0A075B5Z4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav1A0A075B5Z4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trav1A0A075B5Z4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav1A0A075B5Z4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav1A0A075B5Z4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav1A0A075B5Z4 Serp2-204ENSMUST00000228055 705 ntBASIC18.14■□□□□ 0.49
Trav1A0A075B5Z4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav1A0A075B5Z4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav1A0A075B5Z4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav1A0A075B5Z4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav1A0A075B5Z4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav1A0A075B5Z4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav1A0A075B5Z4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav1A0A075B5Z4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Trav1A0A075B5Z4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav1A0A075B5Z4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav1A0A075B5Z4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav1A0A075B5Z4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trav1A0A075B5Z4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav1A0A075B5Z4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav1A0A075B5Z4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav1A0A075B5Z4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav1A0A075B5Z4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav1A0A075B5Z4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Trav1A0A075B5Z4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav1A0A075B5Z4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav1A0A075B5Z4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trav1A0A075B5Z4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav1A0A075B5Z4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.12■□□□□ 0.49
Trav1A0A075B5Z4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav1A0A075B5Z4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.12■□□□□ 0.49
Trav1A0A075B5Z4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav1A0A075B5Z4 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.12■□□□□ 0.49
Trav1A0A075B5Z4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav1A0A075B5Z4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav1A0A075B5Z4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav1A0A075B5Z4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav1A0A075B5Z4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav1A0A075B5Z4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav1A0A075B5Z4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav1A0A075B5Z4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav1A0A075B5Z4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms