Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Gm5244-201ENSMUST00000164001 339 ntBASIC8.03□□□□□ -1.12
Trim63Q38HM4 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Gm8918-201ENSMUST00000190587 1087 ntBASIC8.03□□□□□ -1.12
Trim63Q38HM4 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC8.03□□□□□ -1.12
Trim63Q38HM4 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Gm18062-201ENSMUST00000208020 547 ntBASIC8.03□□□□□ -1.12
Trim63Q38HM4 Gm18055-201ENSMUST00000208254 547 ntBASIC8.03□□□□□ -1.12
Trim63Q38HM4 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Gm17950-201ENSMUST00000214617 646 ntBASIC8.03□□□□□ -1.12
Trim63Q38HM4 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Gm18621-201ENSMUST00000222677 679 ntBASIC8.03□□□□□ -1.12
Trim63Q38HM4 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Trim63Q38HM4 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Cks2-201ENSMUST00000075853 692 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Olfr1513-201ENSMUST00000089739 942 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Gsap-201ENSMUST00000036031 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Atg7-202ENSMUST00000169310 3895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Gm4849-201ENSMUST00000188428 2246 ntBASIC8.03□□□□□ -1.12
Trim63Q38HM4 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Gm42572-201ENSMUST00000202292 3378 ntBASIC8.03□□□□□ -1.12
Trim63Q38HM4 Ncaph2-202ENSMUST00000074552 3299 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Xpnpep2-203ENSMUST00000115000 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 D330050G23Rik-202ENSMUST00000128305 1616 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Pilra-201ENSMUST00000058897 2578 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Trim63Q38HM4 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Ift46-202ENSMUST00000118186 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim63Q38HM4 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC8.02□□□□□ -1.12
Trim63Q38HM4 Zfp408-201ENSMUST00000099714 3469 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.12
Trim63Q38HM4 Gm16204-201ENSMUST00000117864 1897 ntBASIC8.02□□□□□ -1.12
Trim63Q38HM4 Adgrf2-201ENSMUST00000113614 3284 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Trim63Q38HM4 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Trim63Q38HM4 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC8.02□□□□□ -1.13
Trim63Q38HM4 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Mgl2-201ENSMUST00000041550 1586 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Gm42899-201ENSMUST00000197034 2667 ntBASIC8.02□□□□□ -1.13
Trim63Q38HM4 Chrdl2-202ENSMUST00000107084 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Gm29170-201ENSMUST00000190224 3666 ntBASIC8.02□□□□□ -1.13
Trim63Q38HM4 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Gm11509-201ENSMUST00000117358 325 ntBASIC8.02□□□□□ -1.13
Trim63Q38HM4 Gm8302-201ENSMUST00000119217 852 ntBASIC8.02□□□□□ -1.13
Trim63Q38HM4 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC8.02□□□□□ -1.13
Trim63Q38HM4 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
Trim63Q38HM4 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Gm29067-201ENSMUST00000190821 470 ntBASIC8.02□□□□□ -1.13
Trim63Q38HM4 Gm8176-201ENSMUST00000191297 1099 ntBASIC8.02□□□□□ -1.13
Trim63Q38HM4 Gm4430-202ENSMUST00000193902 1041 ntBASIC8.02□□□□□ -1.13
Trim63Q38HM4 Gm9273-201ENSMUST00000200606 715 ntBASIC8.02□□□□□ -1.13
Trim63Q38HM4 Gm42581-201ENSMUST00000201774 966 ntBASIC8.02□□□□□ -1.13
Trim63Q38HM4 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC8.02□□□□□ -1.13
Trim63Q38HM4 Gm17825-201ENSMUST00000206836 794 ntBASIC8.02□□□□□ -1.13
Trim63Q38HM4 Gm45359-201ENSMUST00000210635 427 ntBASIC8.02□□□□□ -1.13
Trim63Q38HM4 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim63Q38HM4 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Max-205ENSMUST00000218640 752 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC8.02□□□□□ -1.13
Trim63Q38HM4 AC166061.1-201ENSMUST00000225163 1138 ntBASIC8.02□□□□□ -1.13
Trim63Q38HM4 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Gm5619-201ENSMUST00000071172 760 ntBASIC8.02□□□□□ -1.13
Trim63Q38HM4 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Epn2-202ENSMUST00000108711 4287 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 4932438H23Rik-202ENSMUST00000114076 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Ndrg3-203ENSMUST00000109558 4023 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 AC164437.4-204ENSMUST00000227169 4024 ntBASIC8.02□□□□□ -1.13
Trim63Q38HM4 Ebf3-205ENSMUST00000209578 1863 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Gm45817-201ENSMUST00000212738 1757 ntBASIC8.02□□□□□ -1.13
Trim63Q38HM4 Phf19-201ENSMUST00000028232 3741 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Cldn34c1-202ENSMUST00000113348 3281 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Fmo5-201ENSMUST00000029729 2453 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim63Q38HM4 Commd2-202ENSMUST00000160959 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim63Q38HM4 Gm45330-201ENSMUST00000209681 1575 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim63Q38HM4 Pdcl-201ENSMUST00000009174 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms