Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 Kirrel3-205ENSMUST00000187182 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Hmgb3O54879 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Hmgb3O54879 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC8.06□□□□□ -1.12
Hmgb3O54879 Cd200-202ENSMUST00000163230 2347 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 Slc2a9-201ENSMUST00000005238 3243 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Hmgb3O54879 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
Hmgb3O54879 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Hmgb3O54879 Gm1821-201ENSMUST00000111388 685 ntBASIC8.06□□□□□ -1.12
Hmgb3O54879 Gm12397-201ENSMUST00000117674 615 ntBASIC8.06□□□□□ -1.12
Hmgb3O54879 Gm14314-201ENSMUST00000118225 1015 ntBASIC8.06□□□□□ -1.12
Hmgb3O54879 Gm14497-201ENSMUST00000119537 580 ntBASIC8.06□□□□□ -1.12
Hmgb3O54879 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC8.06□□□□□ -1.12
Hmgb3O54879 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC8.06□□□□□ -1.12
Hmgb3O54879 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Hmgb3O54879 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Hmgb3O54879 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 Gm45592-201ENSMUST00000209605 1043 ntBASIC8.06□□□□□ -1.12
Hmgb3O54879 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC8.06□□□□□ -1.12
Hmgb3O54879 Gm2875-201ENSMUST00000211333 360 ntBASIC8.06□□□□□ -1.12
Hmgb3O54879 AL672010.1-201ENSMUST00000215182 1246 ntBASIC8.06□□□□□ -1.12
Hmgb3O54879 CT030166.5-201ENSMUST00000222249 420 ntBASIC8.06□□□□□ -1.12
Hmgb3O54879 Gm9946-201ENSMUST00000008011 1025 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Hmgb3O54879 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Hmgb3O54879 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 Serpina3f-203ENSMUST00000167049 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 Gm42970-201ENSMUST00000196407 1352 ntBASIC8.06□□□□□ -1.12
Hmgb3O54879 Lin7a-201ENSMUST00000020057 2363 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 Olfr450-202ENSMUST00000218832 1899 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Hmgb3O54879 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC8.06□□□□□ -1.12
Hmgb3O54879 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 CT010486.2-201ENSMUST00000224003 2714 ntBASIC8.06□□□□□ -1.12
Hmgb3O54879 Gp1ba-201ENSMUST00000055184 2710 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Hmgb3O54879 Hsd17b13-201ENSMUST00000048118 1708 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 3930402G23Rik-201ENSMUST00000040608 3086 ntTSL 2 BASIC8.06□□□□□ -1.12
Hmgb3O54879 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 AC163040.1-201ENSMUST00000222979 4288 ntBASIC8.06□□□□□ -1.12
Hmgb3O54879 Nell2-201ENSMUST00000075275 2675 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb3O54879 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Ikbkap-201ENSMUST00000030140 6160 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Cst6-201ENSMUST00000025764 3951 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Dpp8-202ENSMUST00000167773 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 CT025642.3-201ENSMUST00000225503 4086 ntBASIC8.05□□□□□ -1.12
Hmgb3O54879 Mepe-201ENSMUST00000066207 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm17644-201ENSMUST00000181272 3200 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 4931428F04Rik-205ENSMUST00000212922 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Plcg2-201ENSMUST00000081232 4298 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm20371-201ENSMUST00000203354 1756 ntBASIC8.05□□□□□ -1.12
Hmgb3O54879 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Bag6-211ENSMUST00000173550 3536 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Pax9-203ENSMUST00000153250 4232 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Ccdc116-201ENSMUST00000023452 4210 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Srsf3-202ENSMUST00000130216 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm32335-201ENSMUST00000216896 2948 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm28321-201ENSMUST00000187677 2327 ntBASIC8.05□□□□□ -1.12
Hmgb3O54879 Sorbs1-221ENSMUST00000225786 2314 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Pm20d1-201ENSMUST00000048660 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm12274-201ENSMUST00000120062 385 ntBASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm12154-201ENSMUST00000145584 445 ntTSL 5 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm15881-201ENSMUST00000148792 942 ntBASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm24398-201ENSMUST00000157870 109 ntBASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm15641-201ENSMUST00000161407 670 ntTSL 3 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm44605-201ENSMUST00000206892 949 ntBASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 AC122876.1-201ENSMUST00000217619 825 ntBASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm8255-201ENSMUST00000218693 305 ntBASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm5178-201ENSMUST00000219380 898 ntBASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC8.05□□□□□ -1.12
Hmgb3O54879 AC102368.1-201ENSMUST00000227161 892 ntBASIC8.05□□□□□ -1.12
Hmgb3O54879 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Snx25-207ENSMUST00000170416 3067 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Aldh8a1-201ENSMUST00000042699 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Grik1-206ENSMUST00000211444 3528 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm28405-201ENSMUST00000185222 1498 ntTSL 5 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm29255-201ENSMUST00000185248 1498 ntTSL 5 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm29421-201ENSMUST00000185843 1498 ntTSL 5 BASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms