Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Sec31a-210ENSMUST00000182886 4047 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Ak7-201ENSMUST00000040876 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 5730455P16Rik-201ENSMUST00000103225 4554 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm7052-201ENSMUST00000167568 1512 ntBASIC8.08□□□□□ -1.12
Trim63Q38HM4 Tmem175-203ENSMUST00000120327 1811 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Tshz2-201ENSMUST00000109157 5083 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Fbxo11-201ENSMUST00000005504 4019 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm43343-201ENSMUST00000202454 1926 ntBASIC8.07□□□□□ -1.12
Trim63Q38HM4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm44907-201ENSMUST00000207423 1633 ntBASIC8.07□□□□□ -1.12
Trim63Q38HM4 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Bbs9-201ENSMUST00000039798 3382 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Zfp410-203ENSMUST00000220931 1569 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Prkar2b-203ENSMUST00000146865 3133 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm14398-201ENSMUST00000117287 1073 ntBASIC8.07□□□□□ -1.12
Trim63Q38HM4 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm12986-201ENSMUST00000119037 967 ntBASIC8.07□□□□□ -1.12
Trim63Q38HM4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm12035-201ENSMUST00000121890 623 ntBASIC8.07□□□□□ -1.12
Trim63Q38HM4 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Trim63Q38HM4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC8.07□□□□□ -1.12
Trim63Q38HM4 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm7047-201ENSMUST00000196224 1063 ntBASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm43836-201ENSMUST00000196532 381 ntBASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm43184-201ENSMUST00000197247 542 ntBASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm42634-201ENSMUST00000197362 381 ntBASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm21461-201ENSMUST00000200382 863 ntBASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm43846-201ENSMUST00000200502 932 ntBASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm7504-201ENSMUST00000201449 424 ntBASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm34280-201ENSMUST00000208250 2114 ntTSL 5 BASIC8.07□□□□□ -1.12
Trim63Q38HM4 AC153962.4-201ENSMUST00000217878 242 ntBASIC8.07□□□□□ -1.12
Trim63Q38HM4 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Pde8b-210ENSMUST00000162412 4035 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Tll2-202ENSMUST00000169941 3318 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim63Q38HM4 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC8.07□□□□□ -1.12
Trim63Q38HM4 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC8.07□□□□□ -1.12
Trim63Q38HM4 Pde4b-205ENSMUST00000106904 2430 ntTSL 5 BASIC8.07□□□□□ -1.12
Trim63Q38HM4 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC8.06□□□□□ -1.12
Trim63Q38HM4 Esrrg-203ENSMUST00000110939 4833 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Gm42974-201ENSMUST00000199556 2654 ntBASIC8.06□□□□□ -1.12
Trim63Q38HM4 Hnrnpk-201ENSMUST00000043269 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Foxp3-203ENSMUST00000115739 3739 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Gm45495-201ENSMUST00000200940 1700 ntBASIC8.06□□□□□ -1.12
Trim63Q38HM4 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Spata17-201ENSMUST00000027908 1303 ntAPPRIS P3 TSL 2 BASIC8.06□□□□□ -1.12
Trim63Q38HM4 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC8.06□□□□□ -1.12
Trim63Q38HM4 Lrrc32-201ENSMUST00000165205 3817 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim63Q38HM4 2810471M01Rik-201ENSMUST00000146554 1597 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Apobec3-201ENSMUST00000023054 1842 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Hbp1-202ENSMUST00000172314 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Cd4-201ENSMUST00000024044 3108 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Ccdc33-203ENSMUST00000098682 3117 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim63Q38HM4 1700108F19Rik-205ENSMUST00000190818 1412 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Snx6-204ENSMUST00000218934 1441 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Hmgcs1-201ENSMUST00000179869 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Lingo2-204ENSMUST00000108124 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Gm22133-201ENSMUST00000102082 109 ntBASIC8.06□□□□□ -1.12
Trim63Q38HM4 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Gm12579-201ENSMUST00000118040 783 ntBASIC8.06□□□□□ -1.12
Trim63Q38HM4 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Gm12741-201ENSMUST00000118836 556 ntBASIC8.06□□□□□ -1.12
Trim63Q38HM4 Gm15041-201ENSMUST00000119048 756 ntBASIC8.06□□□□□ -1.12
Trim63Q38HM4 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim63Q38HM4 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim63Q38HM4 H2-M10.5-ps1-201ENSMUST00000174378 939 ntBASIC8.06□□□□□ -1.12
Trim63Q38HM4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms