Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 AC122024.3-201ENSMUST00000217719 294 ntBASIC8.09□□□□□ -1.11
Trim63Q38HM4 CU074400.1-201ENSMUST00000224411 220 ntBASIC8.09□□□□□ -1.11
Trim63Q38HM4 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Mrpl55-201ENSMUST00000045697 940 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim63Q38HM4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Nup98-203ENSMUST00000210682 6694 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Smok3c-201ENSMUST00000110967 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Ndufs1-201ENSMUST00000027111 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Gm44056-201ENSMUST00000204623 1427 ntBASIC8.09□□□□□ -1.11
Trim63Q38HM4 Gm18642-201ENSMUST00000206642 1400 ntBASIC8.09□□□□□ -1.11
Trim63Q38HM4 Gna14-201ENSMUST00000025602 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Ikzf2-207ENSMUST00000190771 2483 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Tmem63c-201ENSMUST00000110187 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Aebp1-201ENSMUST00000102923 3831 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Grhl3-201ENSMUST00000105855 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Gm18632-201ENSMUST00000222597 2087 ntBASIC8.09□□□□□ -1.11
Trim63Q38HM4 Nlrc5-202ENSMUST00000098489 1721 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Gm44843-201ENSMUST00000208320 1396 ntBASIC8.09□□□□□ -1.12
Trim63Q38HM4 Lgals9-202ENSMUST00000108268 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Ephx2-203ENSMUST00000225309 2032 ntBASIC8.08□□□□□ -1.12
Trim63Q38HM4 D830044D21Rik-201ENSMUST00000143315 3897 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Eny2-201ENSMUST00000060652 3000 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 AI182371-206ENSMUST00000226631 1680 ntAPPRIS ALT2 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Nron-203ENSMUST00000156297 3340 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Nfam1-201ENSMUST00000023076 2811 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Zfp112-202ENSMUST00000120006 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Scnn1a-203ENSMUST00000176110 3494 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Ces1b-201ENSMUST00000109582 1964 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Thsd1-202ENSMUST00000160585 3276 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Ywhae-201ENSMUST00000067664 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm38236-201ENSMUST00000192661 3229 ntBASIC8.08□□□□□ -1.12
Trim63Q38HM4 Nbr1-201ENSMUST00000071537 3239 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Lrrc49-203ENSMUST00000114032 2586 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Exoc1-203ENSMUST00000113493 3371 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm26638-201ENSMUST00000181762 1924 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm12490-201ENSMUST00000120255 560 ntBASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm4917-201ENSMUST00000121452 650 ntBASIC8.08□□□□□ -1.12
Trim63Q38HM4 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm14174-201ENSMUST00000153158 161 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm5070-201ENSMUST00000177599 862 ntBASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm28923-201ENSMUST00000187755 322 ntBASIC8.08□□□□□ -1.12
Trim63Q38HM4 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm40414-201ENSMUST00000197608 481 ntBASIC8.08□□□□□ -1.12
Trim63Q38HM4 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm6108-201ENSMUST00000208365 367 ntBASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm45574-201ENSMUST00000210921 331 ntBASIC8.08□□□□□ -1.12
Trim63Q38HM4 Higd1a-202ENSMUST00000213124 713 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 AC159205.5-202ENSMUST00000224849 386 ntBASIC8.08□□□□□ -1.12
Trim63Q38HM4 AC154276.3-201ENSMUST00000227643 998 ntBASIC8.08□□□□□ -1.12
Trim63Q38HM4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 1700012A03Rik-201ENSMUST00000031778 918 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Sult5a1-201ENSMUST00000000755 3805 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Usp28-201ENSMUST00000047349 4133 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm10556-201ENSMUST00000180904 3906 ntTSL 2 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Eif3l-201ENSMUST00000040518 1893 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gpr83-201ENSMUST00000034408 3586 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim63Q38HM4 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms