Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 AC241616.1-201ENSMUST00000213741 166 ntBASIC9.38□□□□□ -0.91
Clrn1Q8K445 AC159246.1-201ENSMUST00000214478 249 ntBASIC9.38□□□□□ -0.91
Clrn1Q8K445 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 AC068459.1-201ENSMUST00000222492 905 ntTSL 3 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 AC152169.1-201ENSMUST00000223901 701 ntBASIC9.38□□□□□ -0.91
Clrn1Q8K445 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Olfr1115-201ENSMUST00000081986 1102 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm10417-201ENSMUST00000194341 3522 ntBASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm7190-201ENSMUST00000118669 1452 ntBASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm45251-201ENSMUST00000209486 1465 ntBASIC9.38□□□□□ -0.91
Clrn1Q8K445 Pdha2-201ENSMUST00000057860 2352 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Catsperd-201ENSMUST00000112979 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Fbxo34-204ENSMUST00000165714 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clrn1Q8K445 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Adgrl3-219ENSMUST00000122356 4853 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Ptpn7-202ENSMUST00000167080 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Sftpa1-202ENSMUST00000170719 2854 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Nt5c1b-203ENSMUST00000143739 1570 ntTSL 2 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 CT572998.1-201ENSMUST00000219636 1557 ntTSL 3 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Ebf1-201ENSMUST00000081265 5981 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 2310043P16Rik-201ENSMUST00000205403 3881 ntBASIC9.37□□□□□ -0.91
Clrn1Q8K445 Pkd1l3-203ENSMUST00000212537 6576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm2897-201ENSMUST00000166494 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm3411-201ENSMUST00000170104 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Lrrc14b-201ENSMUST00000022064 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Garnl3-207ENSMUST00000137381 3551 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Cst6-201ENSMUST00000025764 3951 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Sag-201ENSMUST00000077772 1719 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm43499-201ENSMUST00000202091 2107 ntBASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gdpd1-201ENSMUST00000020804 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gsdme-203ENSMUST00000165099 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Crx-201ENSMUST00000044434 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Tmem184b-205ENSMUST00000228002 3315 ntBASIC9.37□□□□□ -0.91
Clrn1Q8K445 Sdc2-201ENSMUST00000022871 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Csf1r-201ENSMUST00000025523 3870 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Atg14-201ENSMUST00000042988 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gulo-201ENSMUST00000059970 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Dnajc14-201ENSMUST00000026410 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Sipa1l2-201ENSMUST00000108775 6365 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm12943-201ENSMUST00000119616 210 ntBASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm5395-201ENSMUST00000121650 915 ntBASIC9.37□□□□□ -0.91
Clrn1Q8K445 n-R5s175-201ENSMUST00000122599 117 ntBASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Lsm6-204ENSMUST00000146824 541 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm3752-202ENSMUST00000167833 450 ntTSL 5 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm10128-201ENSMUST00000171360 615 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm25951-201ENSMUST00000175330 64 ntBASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm2956-202ENSMUST00000178722 450 ntTSL 5 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm28923-201ENSMUST00000187755 322 ntBASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm10340-202ENSMUST00000188235 615 ntTSL 5 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm17936-201ENSMUST00000199413 988 ntBASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm45135-201ENSMUST00000206787 1184 ntBASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm30873-201ENSMUST00000207512 1222 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm45349-201ENSMUST00000210285 1074 ntTSL 5 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm9644-201ENSMUST00000212828 1183 ntBASIC9.37□□□□□ -0.91
Clrn1Q8K445 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm40879-201ENSMUST00000220759 612 ntBASIC9.37□□□□□ -0.91
Clrn1Q8K445 Olfr709-ps1-201ENSMUST00000072368 924 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Epha5-203ENSMUST00000113399 5166 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Spry4-201ENSMUST00000025295 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Smcr8-201ENSMUST00000056907 7391 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Gm33940-201ENSMUST00000209205 1601 ntTSL 5 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Il6st-210ENSMUST00000184949 2571 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Esrp2-201ENSMUST00000115979 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Vps8-204ENSMUST00000117598 4935 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Pilra-202ENSMUST00000110980 1371 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms