Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 A830010M20Rik-201ENSMUST00000060553 2439 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Zfp93-202ENSMUST00000108438 3508 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm44627-201ENSMUST00000206739 1531 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Supt20-211ENSMUST00000200441 2154 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 AC192333.5-201ENSMUST00000224620 2350 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 AC158355.1-201ENSMUST00000215895 1705 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm45153-201ENSMUST00000205957 1901 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm12218-201ENSMUST00000117666 399 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm16209-201ENSMUST00000118457 627 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm12136-201ENSMUST00000120460 1209 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Lsm6-204ENSMUST00000146824 541 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm25261-201ENSMUST00000157416 134 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm4982-201ENSMUST00000160440 1098 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm10731-201ENSMUST00000181171 448 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm37748-201ENSMUST00000194379 1140 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 AY036118-201ENSMUST00000200021 923 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm3926-201ENSMUST00000223378 1123 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 AC118639.2-201ENSMUST00000226289 223 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gpr87-201ENSMUST00000056898 1080 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Rassf8-202ENSMUST00000058538 1131 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 4930533K18Rik-201ENSMUST00000058942 1259 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Snora73a-201ENSMUST00000082453 205 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Vmn1r223-201ENSMUST00000091719 1086 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gimap8-201ENSMUST00000078223 3160 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gtf2f2-201ENSMUST00000088922 1467 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Tacr3-201ENSMUST00000029822 3762 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gabrr3-201ENSMUST00000114341 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 4930534H03Rik-201ENSMUST00000216311 1669 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm4451-201ENSMUST00000186000 1891 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Jade1-206ENSMUST00000191952 3327 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Zcchc18-203ENSMUST00000113067 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Cep57-203ENSMUST00000124883 1643 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm4926-201ENSMUST00000132691 1610 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm45663-201ENSMUST00000210429 1632 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm43113-201ENSMUST00000199713 1754 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Pex5l-209ENSMUST00000193289 3526 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Slc7a8-201ENSMUST00000022787 4084 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 AC139350.2-201ENSMUST00000226508 2331 ntBASIC8.09□□□□□ -1.11
Trim63Q38HM4 Ces3a-202ENSMUST00000093223 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Mgam2-ps-203ENSMUST00000216691 1709 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Cyp4v3-201ENSMUST00000095328 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Rsrc1-203ENSMUST00000065074 3224 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Gm43785-201ENSMUST00000201036 1345 ntBASIC8.09□□□□□ -1.11
Trim63Q38HM4 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Trim63Q38HM4 C2cd5-202ENSMUST00000111758 4062 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Zfp74-201ENSMUST00000032797 2040 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Gm12138-201ENSMUST00000122180 951 ntBASIC8.09□□□□□ -1.11
Trim63Q38HM4 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC8.09□□□□□ -1.11
Trim63Q38HM4 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim63Q38HM4 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC8.09□□□□□ -1.11
Trim63Q38HM4 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC8.09□□□□□ -1.11
Trim63Q38HM4 Gm7653-201ENSMUST00000214567 508 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms