Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Gm10580-201ENSMUST00000097985 396 ntBASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Gm10582-201ENSMUST00000097987 396 ntBASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Gm10583-201ENSMUST00000097988 396 ntBASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Boc-201ENSMUST00000114634 4451 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Zmat3-203ENSMUST00000168566 7672 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Ubap2-201ENSMUST00000030143 4368 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Trio-210ENSMUST00000227337 6375 ntBASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Myo7b-201ENSMUST00000134663 6621 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Kcne1-201ENSMUST00000051705 3155 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Dnajc14-201ENSMUST00000026410 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Gm42651-201ENSMUST00000199851 1339 ntBASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Gm9519-201ENSMUST00000206108 1337 ntBASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Mcm10-202ENSMUST00000102985 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 D3Ertd751e-201ENSMUST00000026867 1989 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Sec61a2Q9JLR1 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Sec61a2Q9JLR1 Dmbx1-202ENSMUST00000084338 4031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Sec61a2Q9JLR1 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
Sec61a2Q9JLR1 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Sec61a2Q9JLR1 Kif1b-202ENSMUST00000055647 5992 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Sec61a2Q9JLR1 Glb1l2-202ENSMUST00000066560 3688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Sec61a2Q9JLR1 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Sec61a2Q9JLR1 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.96
Sec61a2Q9JLR1 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
Sec61a2Q9JLR1 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Sec61a2Q9JLR1 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Dgkd-201ENSMUST00000027517 5695 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gm43412-201ENSMUST00000197455 2818 ntBASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gm5310-201ENSMUST00000197861 1511 ntBASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Mettl8-204ENSMUST00000112186 2347 ntAPPRIS P2 TSL 2 BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gm10634-202ENSMUST00000188891 2464 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Uspl1-206ENSMUST00000122160 3827 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Myl6-201ENSMUST00000164181 665 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gm38349-201ENSMUST00000195732 462 ntBASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gm40879-201ENSMUST00000220759 612 ntBASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gm43305-202ENSMUST00000225083 705 ntBASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 AC119177.2-201ENSMUST00000226699 629 ntBASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 AC142266.1-201ENSMUST00000228107 415 ntBASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Mid1-202ENSMUST00000078947 3591 ntTSL 5 BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Cyp2e1-201ENSMUST00000026552 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Rdh16f1-201ENSMUST00000128247 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Kirrel3-208ENSMUST00000188933 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gm17644-201ENSMUST00000181272 3200 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Lmbrd1-206ENSMUST00000191471 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Limk1-202ENSMUST00000111233 3109 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61a2Q9JLR1 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms