Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Cd9P40240 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC9.85□□□□□ -0.83
Cd9P40240 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Gm16560-201ENSMUST00000159115 404 ntBASIC9.85□□□□□ -0.83
Cd9P40240 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Gm5501-201ENSMUST00000165917 832 ntBASIC9.85□□□□□ -0.83
Cd9P40240 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 2410141K09Rik-204ENSMUST00000173583 515 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Gm8079-201ENSMUST00000182695 975 ntBASIC9.85□□□□□ -0.83
Cd9P40240 Gm9916-201ENSMUST00000192943 1228 ntBASIC9.85□□□□□ -0.83
Cd9P40240 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC9.85□□□□□ -0.83
Cd9P40240 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC9.85□□□□□ -0.83
Cd9P40240 Upp1-201ENSMUST00000020677 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Max-205ENSMUST00000218640 752 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 AC161877.1-201ENSMUST00000227736 699 ntBASIC9.85□□□□□ -0.83
Cd9P40240 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Cd9P40240 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Cdkl1-201ENSMUST00000021377 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Tnfsf18-201ENSMUST00000086084 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Gm43847-201ENSMUST00000200070 1940 ntBASIC9.85□□□□□ -0.83
Cd9P40240 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC9.85□□□□□ -0.83
Cd9P40240 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Sept11-207ENSMUST00000202217 1380 ntTSL 5 BASIC9.85□□□□□ -0.83
Cd9P40240 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC9.85□□□□□ -0.83
Cd9P40240 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Cd9P40240 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Rnf111-202ENSMUST00000113595 4735 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
Cd9P40240 Rnf111-207ENSMUST00000215848 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Cd9P40240 Gm37307-201ENSMUST00000193663 2621 ntBASIC9.85□□□□□ -0.83
Cd9P40240 Itsn1-204ENSMUST00000113993 3787 ntTSL 5 BASIC9.85□□□□□ -0.83
Cd9P40240 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd9P40240 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Cd9P40240 AC102847.1-201ENSMUST00000228390 2498 ntBASIC9.84□□□□□ -0.83
Cd9P40240 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Gm44992-210ENSMUST00000210126 1330 ntTSL 5 BASIC9.84□□□□□ -0.83
Cd9P40240 Platr9-202ENSMUST00000149572 1556 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Zswim2-201ENSMUST00000038223 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Creb5-201ENSMUST00000047450 2330 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
Cd9P40240 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
Cd9P40240 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Cd9P40240 Tomm40l-202ENSMUST00000111326 2753 ntTSL 5 BASIC9.84□□□□□ -0.83
Cd9P40240 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Cd9P40240 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Gm37178-201ENSMUST00000194962 1539 ntBASIC9.84□□□□□ -0.83
Cd9P40240 Ldb2-205ENSMUST00000199261 2367 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
Cd9P40240 Gm15968-201ENSMUST00000119342 1168 ntBASIC9.84□□□□□ -0.83
Cd9P40240 Gm5766-202ENSMUST00000161633 799 ntBASIC9.84□□□□□ -0.83
Cd9P40240 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Cd9P40240 Gm4960-201ENSMUST00000182928 1001 ntBASIC9.84□□□□□ -0.83
Cd9P40240 Gm6317-201ENSMUST00000183159 1000 ntBASIC9.84□□□□□ -0.83
Cd9P40240 Gm7815-201ENSMUST00000196104 832 ntBASIC9.84□□□□□ -0.83
Cd9P40240 Gm43761-201ENSMUST00000202132 991 ntBASIC9.84□□□□□ -0.83
Cd9P40240 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC9.84□□□□□ -0.83
Cd9P40240 AC130217.1-201ENSMUST00000224146 909 ntBASIC9.84□□□□□ -0.83
Cd9P40240 Plcd4-201ENSMUST00000027362 2977 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Gm4889-201ENSMUST00000075321 444 ntBASIC9.84□□□□□ -0.83
Cd9P40240 Gm22341-201ENSMUST00000083775 129 ntBASIC9.84□□□□□ -0.83
Cd9P40240 Gm26511-201ENSMUST00000181400 1895 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC9.84□□□□□ -0.83
Cd9P40240 Hnrnpc-201ENSMUST00000111610 2847 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Hnrnpc-202ENSMUST00000164655 2843 ntTSL 5 BASIC9.84□□□□□ -0.83
Cd9P40240 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Cd9P40240 Dcstamp-204ENSMUST00000227792 1367 ntBASIC9.84□□□□□ -0.83
Cd9P40240 4930470P17Rik-201ENSMUST00000062355 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Xpnpep2-202ENSMUST00000114998 3017 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Gm7190-201ENSMUST00000118669 1452 ntBASIC9.84□□□□□ -0.83
Cd9P40240 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Crispld2-203ENSMUST00000132583 4182 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Tmx2-202ENSMUST00000111664 1926 ntTSL 3 BASIC9.84□□□□□ -0.83
Cd9P40240 Fam110c-201ENSMUST00000041133 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cd9P40240 Pdha2-201ENSMUST00000057860 2352 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Cd9P40240 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Cd9P40240 4933415A04Rik-201ENSMUST00000056256 2009 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Cd9P40240 Inpp4b-212ENSMUST00000215332 5486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cd9P40240 4933416O17Rik-201ENSMUST00000220972 2122 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cd9P40240 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cd9P40240 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cd9P40240 Zic3-201ENSMUST00000088627 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cd9P40240 Mefv-201ENSMUST00000023180 3126 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms