Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Hmgb3O54879 Zfp131-203ENSMUST00000223722 3109 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.11
Hmgb3O54879 Samd15-202ENSMUST00000182869 2031 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Hmgb3O54879 Slc7a9-201ENSMUST00000032703 1940 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Hmgb3O54879 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Hmgb3O54879 Gm37459-201ENSMUST00000192259 2840 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Hmgb3O54879 Suv39h1-202ENSMUST00000115637 2778 ntTSL 2 BASIC8.15□□□□□ -1.11
Hmgb3O54879 Tmod3-201ENSMUST00000072232 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Hmgb3O54879 Phc1-202ENSMUST00000081849 3683 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Hmgb3O54879 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Hmgb3O54879 Gm20953-201ENSMUST00000216399 2614 ntBASIC8.15□□□□□ -1.11
Hmgb3O54879 Lpin3-203ENSMUST00000109456 3470 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Hmgb3O54879 Gm45719-201ENSMUST00000207954 1662 ntBASIC8.14□□□□□ -1.11
Hmgb3O54879 Rbm5-214ENSMUST00000182659 3205 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Sulf1-203ENSMUST00000180062 4636 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Gm43625-201ENSMUST00000199177 1539 ntBASIC8.14□□□□□ -1.11
Hmgb3O54879 Baiap3-204ENSMUST00000182435 3758 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Hmgb3O54879 Fam187b-201ENSMUST00000058093 1485 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Tulp2-209ENSMUST00000210813 2153 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Trpc7-201ENSMUST00000022023 3483 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Hmgb3O54879 Nim1k-201ENSMUST00000178142 4103 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Gm9866-205ENSMUST00000220998 1973 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
Hmgb3O54879 Gm6500-201ENSMUST00000119412 451 ntBASIC8.14□□□□□ -1.11
Hmgb3O54879 Gm14585-201ENSMUST00000120713 634 ntBASIC8.14□□□□□ -1.11
Hmgb3O54879 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 n-R5s84-201ENSMUST00000122591 109 ntBASIC8.14□□□□□ -1.11
Hmgb3O54879 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC8.14□□□□□ -1.11
Hmgb3O54879 Gm44980-201ENSMUST00000205826 314 ntBASIC8.14□□□□□ -1.11
Hmgb3O54879 Gm39288-201ENSMUST00000210554 446 ntBASIC8.14□□□□□ -1.11
Hmgb3O54879 BC106175-202ENSMUST00000219344 1213 ntBASIC8.14□□□□□ -1.11
Hmgb3O54879 5430437J10Rik-202ENSMUST00000227355 634 ntBASIC8.14□□□□□ -1.11
Hmgb3O54879 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC8.14□□□□□ -1.11
Hmgb3O54879 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Hmgb3O54879 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Mir433-201ENSMUST00000093564 124 ntBASIC8.14□□□□□ -1.11
Hmgb3O54879 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Hmgb3O54879 Olfr126-203ENSMUST00000217487 1859 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Hmgb3O54879 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC8.14□□□□□ -1.11
Hmgb3O54879 Hyal1-201ENSMUST00000010195 3014 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Gnpda2-206ENSMUST00000166298 1755 ntAPPRIS ALT1 TSL 5 BASIC8.14□□□□□ -1.11
Hmgb3O54879 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Gm26911-201ENSMUST00000181770 1737 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Gng7-201ENSMUST00000092285 3362 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Gm37798-201ENSMUST00000193026 2169 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Gm4810-201ENSMUST00000177721 1607 ntBASIC8.14□□□□□ -1.11
Hmgb3O54879 Exosc1-201ENSMUST00000075280 1622 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Bco2-201ENSMUST00000119103 2118 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Hmgb3O54879 Xpnpep2-203ENSMUST00000115000 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Rab5b-201ENSMUST00000000727 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Hmgb3O54879 Ptpn5-202ENSMUST00000102626 3137 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb3O54879 Mc1r-201ENSMUST00000098324 3638 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Hmgb3O54879 Lamb3-201ENSMUST00000016315 4056 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Styk1-201ENSMUST00000049150 3380 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Lrrcc1-201ENSMUST00000091325 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Dusp3-203ENSMUST00000107173 4311 ntTSL 2 BASIC8.13□□□□□ -1.11
Hmgb3O54879 Gm26773-201ENSMUST00000180772 2868 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Ctnna2-201ENSMUST00000075340 2864 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Hmgb3O54879 Nifk-201ENSMUST00000027626 1889 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Ccnd1-201ENSMUST00000093962 3740 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Actl9-201ENSMUST00000174088 1373 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Hmgb3O54879 Slc25a14-204ENSMUST00000134257 1805 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
Hmgb3O54879 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Ttll7-203ENSMUST00000106134 2664 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Hmgb3O54879 Gm44812-201ENSMUST00000207627 5349 ntTSL 5 BASIC8.13□□□□□ -1.11
Hmgb3O54879 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Pla2g16-201ENSMUST00000025925 3523 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Slc25a13-201ENSMUST00000015256 3067 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Esrrb-204ENSMUST00000116402 4300 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 1700110I01Rik-202ENSMUST00000112812 1737 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Pard3b-201ENSMUST00000046673 3426 ntTSL 5 BASIC8.13□□□□□ -1.11
Hmgb3O54879 Spata31d1b-201ENSMUST00000165133 4287 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Ighv13-1-201ENSMUST00000103480 294 ntBASIC8.13□□□□□ -1.11
Hmgb3O54879 Mir453-201ENSMUST00000104732 82 ntBASIC8.13□□□□□ -1.11
Hmgb3O54879 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC8.13□□□□□ -1.11
Hmgb3O54879 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC8.13□□□□□ -1.11
Hmgb3O54879 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC8.13□□□□□ -1.11
Hmgb3O54879 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC8.13□□□□□ -1.11
Hmgb3O54879 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC8.13□□□□□ -1.11
Hmgb3O54879 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC8.13□□□□□ -1.11
Hmgb3O54879 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Gm37299-201ENSMUST00000193951 826 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 131.8 ms