Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Thsd1-203ENSMUST00000162447 3273 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Nol11-201ENSMUST00000018577 3158 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Gm43526-201ENSMUST00000196666 1565 ntBASIC8.15□□□□□ -1.1
Trim63Q38HM4 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Myzap-204ENSMUST00000169573 1393 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Gm44812-201ENSMUST00000207627 5349 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Gm14127-201ENSMUST00000117906 678 ntBASIC8.15□□□□□ -1.1
Trim63Q38HM4 Gm15549-201ENSMUST00000121595 622 ntBASIC8.15□□□□□ -1.1
Trim63Q38HM4 Gm4887-201ENSMUST00000122230 1053 ntBASIC8.15□□□□□ -1.1
Trim63Q38HM4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC8.15□□□□□ -1.1
Trim63Q38HM4 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Gm27813-201ENSMUST00000184343 354 ntBASIC8.15□□□□□ -1.1
Trim63Q38HM4 Gm29266-201ENSMUST00000190392 600 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Gm43433-201ENSMUST00000196573 481 ntBASIC8.15□□□□□ -1.1
Trim63Q38HM4 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Gm37484-201ENSMUST00000195378 2523 ntBASIC8.15□□□□□ -1.1
Trim63Q38HM4 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Pramef12-201ENSMUST00000030326 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Siglech-202ENSMUST00000094360 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim63Q38HM4 Ank3-219ENSMUST00000182437 3113 ntTSL 5 BASIC8.15□□□□□ -1.11
Trim63Q38HM4 Spire1-207ENSMUST00000224799 2059 ntBASIC8.15□□□□□ -1.11
Trim63Q38HM4 Ednrb-201ENSMUST00000022718 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim63Q38HM4 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim63Q38HM4 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim63Q38HM4 Gm10101-202ENSMUST00000181311 2919 ntBASIC8.15□□□□□ -1.11
Trim63Q38HM4 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Trim63Q38HM4 Myo1h-201ENSMUST00000124316 2877 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Trim63Q38HM4 Hnrnpc-202ENSMUST00000164655 2843 ntTSL 5 BASIC8.15□□□□□ -1.11
Trim63Q38HM4 Gm43890-201ENSMUST00000203437 2799 ntBASIC8.15□□□□□ -1.11
Trim63Q38HM4 Zfp42-203ENSMUST00000211248 1837 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim63Q38HM4 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim63Q38HM4 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim63Q38HM4 Nipal4-201ENSMUST00000020679 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim63Q38HM4 Gm38024-201ENSMUST00000192338 2532 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Ubxn2b-201ENSMUST00000029907 6642 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Tmem19-209ENSMUST00000219890 2949 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 D630003M21Rik-203ENSMUST00000169335 3457 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Ces1e-201ENSMUST00000034173 2073 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Pcdhb8-201ENSMUST00000051163 3334 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm23251-201ENSMUST00000103773 110 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Mir1247-201ENSMUST00000116706 82 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm11478-201ENSMUST00000117851 599 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm13651-201ENSMUST00000119086 1110 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm12266-201ENSMUST00000120311 962 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm24239-201ENSMUST00000157791 255 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm43438-201ENSMUST00000198133 379 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm19187-201ENSMUST00000206781 892 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm4157-201ENSMUST00000211647 679 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm40466-201ENSMUST00000212174 422 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm6867-201ENSMUST00000219165 425 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Olfr1347-205ENSMUST00000220413 964 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 AC124581.2-201ENSMUST00000225459 282 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Olfr434-201ENSMUST00000076752 1056 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms