Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Gm26943-201ENSMUST00000182295 957 ntBASIC8.16□□□□□ -1.1
Hmgb3O54879 Mir8113-201ENSMUST00000184956 129 ntBASIC8.16□□□□□ -1.1
Hmgb3O54879 Gm28857-201ENSMUST00000188068 425 ntTSL 3 BASIC8.16□□□□□ -1.1
Hmgb3O54879 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Gm17826-201ENSMUST00000189720 798 ntBASIC8.16□□□□□ -1.1
Hmgb3O54879 Nr5a2-203ENSMUST00000192357 1859 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Hmgb3O54879 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Gm42660-201ENSMUST00000197733 947 ntBASIC8.16□□□□□ -1.1
Hmgb3O54879 Eno4-202ENSMUST00000200910 2567 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
Hmgb3O54879 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Gm45193-201ENSMUST00000204686 1552 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Gm45120-201ENSMUST00000208880 408 ntBASIC8.16□□□□□ -1.1
Hmgb3O54879 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC8.16□□□□□ -1.1
Hmgb3O54879 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC8.16□□□□□ -1.1
Hmgb3O54879 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Hmgb3O54879 AC159376.1-201ENSMUST00000218504 630 ntBASIC8.16□□□□□ -1.1
Hmgb3O54879 Gm4797-201ENSMUST00000219075 1283 ntBASIC8.16□□□□□ -1.1
Hmgb3O54879 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC8.16□□□□□ -1.1
Hmgb3O54879 AC154257.1-202ENSMUST00000224729 843 ntBASIC8.16□□□□□ -1.1
Hmgb3O54879 Mak-205ENSMUST00000224740 2354 ntAPPRIS ALT2 BASIC8.16□□□□□ -1.1
Hmgb3O54879 Mtbp-201ENSMUST00000022998 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Patj-202ENSMUST00000041284 7340 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Eno4-201ENSMUST00000054280 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Zfp286-201ENSMUST00000054654 3051 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 4930533K18Rik-201ENSMUST00000058942 1259 ntTSL 5 BASIC8.16□□□□□ -1.1
Hmgb3O54879 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Unc13d-201ENSMUST00000075036 3967 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
Hmgb3O54879 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC8.16□□□□□ -1.1
Hmgb3O54879 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Hmgb3O54879 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Hmgb3O54879 Cfap43-205ENSMUST00000160247 5264 ntTSL 5 BASIC8.16□□□□□ -1.1
Hmgb3O54879 Ccdc148-201ENSMUST00000077687 3977 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC8.16□□□□□ -1.1
Hmgb3O54879 C78197-201ENSMUST00000152781 3417 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Mfsd8-201ENSMUST00000026859 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Ttll8-201ENSMUST00000109371 2968 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Ablim1-203ENSMUST00000104902 5907 ntTSL 5 BASIC8.16□□□□□ -1.1
Hmgb3O54879 Slc28a1-201ENSMUST00000026820 2846 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Best3-201ENSMUST00000020378 2719 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb3O54879 Foxp2-205ENSMUST00000115474 2544 ntTSL 5 BASIC8.15□□□□□ -1.1
Hmgb3O54879 Abcb1a-201ENSMUST00000047753 4997 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Fndc9-201ENSMUST00000060185 2290 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Adal-202ENSMUST00000066155 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Trpv5-202ENSMUST00000193503 2025 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Hmgb3O54879 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Hmgb3O54879 Dclre1c-202ENSMUST00000100463 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Slc17a3-203ENSMUST00000110422 1764 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Hmgb3O54879 Pdgfd-202ENSMUST00000168039 1795 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 L3mbtl2-201ENSMUST00000023029 3487 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Gm7208-202ENSMUST00000212442 1627 ntBASIC8.15□□□□□ -1.1
Hmgb3O54879 Rabep1-206ENSMUST00000177731 3167 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Epb41l3-215ENSMUST00000225977 3188 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.1
Hmgb3O54879 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Atxn7l1-212ENSMUST00000146040 2973 ntAPPRIS P5 TSL 5 BASIC8.15□□□□□ -1.1
Hmgb3O54879 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC8.15□□□□□ -1.1
Hmgb3O54879 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Gm5764-201ENSMUST00000118817 885 ntBASIC8.15□□□□□ -1.1
Hmgb3O54879 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC8.15□□□□□ -1.1
Hmgb3O54879 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC8.15□□□□□ -1.1
Hmgb3O54879 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Hmgb3O54879 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Hmgb3O54879 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Gm7719-201ENSMUST00000182374 975 ntBASIC8.15□□□□□ -1.1
Hmgb3O54879 Mir6360-201ENSMUST00000184278 126 ntBASIC8.15□□□□□ -1.1
Hmgb3O54879 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC8.15□□□□□ -1.1
Hmgb3O54879 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC8.15□□□□□ -1.1
Hmgb3O54879 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC8.15□□□□□ -1.1
Hmgb3O54879 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC8.15□□□□□ -1.1
Hmgb3O54879 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
Hmgb3O54879 Gm9132-201ENSMUST00000210182 832 ntBASIC8.15□□□□□ -1.1
Hmgb3O54879 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC8.15□□□□□ -1.1
Hmgb3O54879 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC8.15□□□□□ -1.1
Hmgb3O54879 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC8.15□□□□□ -1.1
Hmgb3O54879 AC129219.2-201ENSMUST00000224324 701 ntBASIC8.15□□□□□ -1.1
Hmgb3O54879 Spcs1-203ENSMUST00000226374 592 ntBASIC8.15□□□□□ -1.1
Hmgb3O54879 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Hmgb3O54879 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Klk1b4-201ENSMUST00000077354 839 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Dad1-202ENSMUST00000128231 3491 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Lyn-202ENSMUST00000103010 3387 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb3O54879 Col19a1-201ENSMUST00000051344 3336 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 147.8 ms