Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Gm37782-201ENSMUST00000194879 678 ntBASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Gm3527-201ENSMUST00000198905 460 ntBASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Gm7939-201ENSMUST00000201233 1050 ntBASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 BC080696-201ENSMUST00000202858 1218 ntBASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Gm45893-201ENSMUST00000211899 247 ntBASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 AC124408.1-201ENSMUST00000228938 707 ntBASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Npnt-205ENSMUST00000117456 3383 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 2810471M01Rik-201ENSMUST00000146554 1597 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Ppcdc-201ENSMUST00000085709 2744 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Cep83os-201ENSMUST00000181906 6566 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Tmem170b-201ENSMUST00000129449 7168 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Csf2rb-201ENSMUST00000096355 4764 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61a2Q9JLR1 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Ttll2-201ENSMUST00000115747 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 9530026P05Rik-201ENSMUST00000181121 2142 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 D430042O09Rik-203ENSMUST00000124223 5874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Ank3-206ENSMUST00000092434 5886 ntAPPRIS P4 TSL 5 BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Epha5-203ENSMUST00000113399 5166 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Zeb2-215ENSMUST00000200844 4064 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 2310043P16Rik-201ENSMUST00000205403 3881 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Decr1-201ENSMUST00000029877 2959 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 AC117245.3-201ENSMUST00000217495 2176 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Gm23745-201ENSMUST00000104230 125 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Gm22594-201ENSMUST00000104251 130 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Gm24470-201ENSMUST00000104486 132 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Gm12645-201ENSMUST00000117297 275 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Gm11235-201ENSMUST00000117763 333 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Gm16581-201ENSMUST00000160730 991 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Gm6291-201ENSMUST00000179994 309 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Gm28916-201ENSMUST00000186988 699 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Gm5621-201ENSMUST00000187303 640 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Gm37436-201ENSMUST00000193842 1085 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Gm43244-201ENSMUST00000196994 1285 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Gm18123-201ENSMUST00000210874 822 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Gm18122-201ENSMUST00000211390 904 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Gm17872-201ENSMUST00000222550 532 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 AC174797.2-201ENSMUST00000225835 165 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 AC156016.4-201ENSMUST00000227470 647 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 AC141884.2-201ENSMUST00000228811 775 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Gm37759-201ENSMUST00000194155 3246 ntBASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Myadm-201ENSMUST00000096744 2814 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 BC017643-202ENSMUST00000106115 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Napb-201ENSMUST00000028926 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Pik3r3-202ENSMUST00000106490 1830 ntTSL 5 BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Hdac7-203ENSMUST00000116408 4226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Nlrc5-202ENSMUST00000098489 1721 ntTSL 5 BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Pnpla7-201ENSMUST00000045295 4574 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Zfp61-201ENSMUST00000077780 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61a2Q9JLR1 Micalcl-202ENSMUST00000051308 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms