Protein–RNA interactions for Protein: S4R299

Zfp236, Zinc finger protein 236, mousemouse

Predictions only

Length 1,847 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp236S4R299 Gm27801-201ENSMUST00000184174 223 ntBASIC20.62■□□□□ 0.89
Zfp236S4R299 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zfp236S4R299 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zfp236S4R299 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zfp236S4R299 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.62■□□□□ 0.89
Zfp236S4R299 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Zfp236S4R299 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Zfp236S4R299 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Zfp236S4R299 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Zfp236S4R299 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp236S4R299 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp236S4R299 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp236S4R299 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp236S4R299 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp236S4R299 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp236S4R299 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Zfp236S4R299 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp236S4R299 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp236S4R299 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp236S4R299 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp236S4R299 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp236S4R299 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp236S4R299 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp236S4R299 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp236S4R299 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.6■□□□□ 0.89
Zfp236S4R299 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.6■□□□□ 0.89
Zfp236S4R299 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp236S4R299 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.6■□□□□ 0.89
Zfp236S4R299 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp236S4R299 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp236S4R299 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.6■□□□□ 0.89
Zfp236S4R299 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.59■□□□□ 0.89
Zfp236S4R299 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp236S4R299 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp236S4R299 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp236S4R299 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp236S4R299 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp236S4R299 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.59■□□□□ 0.89
Zfp236S4R299 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp236S4R299 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Zfp236S4R299 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp236S4R299 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp236S4R299 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Zfp236S4R299 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp236S4R299 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Zfp236S4R299 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zfp236S4R299 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Zfp236S4R299 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zfp236S4R299 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zfp236S4R299 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zfp236S4R299 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zfp236S4R299 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Zfp236S4R299 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zfp236S4R299 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zfp236S4R299 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.57■□□□□ 0.88
Zfp236S4R299 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp236S4R299 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.57■□□□□ 0.88
Zfp236S4R299 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp236S4R299 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp236S4R299 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp236S4R299 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp236S4R299 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.57■□□□□ 0.88
Zfp236S4R299 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp236S4R299 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.57■□□□□ 0.88
Zfp236S4R299 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.57■□□□□ 0.88
Zfp236S4R299 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp236S4R299 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp236S4R299 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp236S4R299 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp236S4R299 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Zfp236S4R299 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp236S4R299 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp236S4R299 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.56■□□□□ 0.88
Zfp236S4R299 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp236S4R299 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp236S4R299 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.56■□□□□ 0.88
Zfp236S4R299 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp236S4R299 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp236S4R299 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.56■□□□□ 0.88
Zfp236S4R299 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp236S4R299 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp236S4R299 Gm12933-201ENSMUST00000120203 872 ntBASIC20.55■□□□□ 0.88
Zfp236S4R299 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.55■□□□□ 0.88
Zfp236S4R299 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp236S4R299 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Zfp236S4R299 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp236S4R299 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp236S4R299 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Zfp236S4R299 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.55■□□□□ 0.88
Zfp236S4R299 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp236S4R299 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp236S4R299 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp236S4R299 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.54■□□□□ 0.88
Zfp236S4R299 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp236S4R299 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp236S4R299 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp236S4R299 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp236S4R299 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.54■□□□□ 0.88
Zfp236S4R299 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp236S4R299 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms