Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crlf3Q9Z2L7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Crlf3Q9Z2L7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crlf3Q9Z2L7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crlf3Q9Z2L7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crlf3Q9Z2L7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Crlf3Q9Z2L7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.76■□□□□ 0.75
Crlf3Q9Z2L7 Gm10232-201ENSMUST00000089221 720 ntBASIC19.76■□□□□ 0.75
Crlf3Q9Z2L7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crlf3Q9Z2L7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Crlf3Q9Z2L7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Crlf3Q9Z2L7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Crlf3Q9Z2L7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crlf3Q9Z2L7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crlf3Q9Z2L7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crlf3Q9Z2L7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crlf3Q9Z2L7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crlf3Q9Z2L7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Crlf3Q9Z2L7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Crlf3Q9Z2L7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Crlf3Q9Z2L7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Crlf3Q9Z2L7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Crlf3Q9Z2L7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Crlf3Q9Z2L7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Crlf3Q9Z2L7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Crlf3Q9Z2L7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Crlf3Q9Z2L7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Crlf3Q9Z2L7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Crlf3Q9Z2L7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Crlf3Q9Z2L7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Crlf3Q9Z2L7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Crlf3Q9Z2L7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Crlf3Q9Z2L7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Crlf3Q9Z2L7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Crlf3Q9Z2L7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.74■□□□□ 0.75
Crlf3Q9Z2L7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Crlf3Q9Z2L7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Crlf3Q9Z2L7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Crlf3Q9Z2L7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Crlf3Q9Z2L7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Crlf3Q9Z2L7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Crlf3Q9Z2L7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Crlf3Q9Z2L7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Crlf3Q9Z2L7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Crlf3Q9Z2L7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Crlf3Q9Z2L7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Crlf3Q9Z2L7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Crlf3Q9Z2L7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Crlf3Q9Z2L7 Golph3-205ENSMUST00000228671 2842 ntBASIC19.72■□□□□ 0.75
Crlf3Q9Z2L7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Crlf3Q9Z2L7 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.72■□□□□ 0.75
Crlf3Q9Z2L7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Crlf3Q9Z2L7 Gm14117-201ENSMUST00000122417 843 ntBASIC19.72■□□□□ 0.75
Crlf3Q9Z2L7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.72■□□□□ 0.75
Crlf3Q9Z2L7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Crlf3Q9Z2L7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Crlf3Q9Z2L7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Crlf3Q9Z2L7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Crlf3Q9Z2L7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Crlf3Q9Z2L7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Crlf3Q9Z2L7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.7■□□□□ 0.74
Crlf3Q9Z2L7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Crlf3Q9Z2L7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.7■□□□□ 0.74
Crlf3Q9Z2L7 Gm45102-201ENSMUST00000207427 857 ntBASIC19.7■□□□□ 0.74
Crlf3Q9Z2L7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Crlf3Q9Z2L7 Gm9959-201ENSMUST00000068277 390 ntBASIC19.7■□□□□ 0.74
Crlf3Q9Z2L7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Crlf3Q9Z2L7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Crlf3Q9Z2L7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Crlf3Q9Z2L7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Crlf3Q9Z2L7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Crlf3Q9Z2L7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Crlf3Q9Z2L7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Crlf3Q9Z2L7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.69■□□□□ 0.74
Crlf3Q9Z2L7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.69■□□□□ 0.74
Crlf3Q9Z2L7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Crlf3Q9Z2L7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Crlf3Q9Z2L7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Crlf3Q9Z2L7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Crlf3Q9Z2L7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.68■□□□□ 0.74
Crlf3Q9Z2L7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.68■□□□□ 0.74
Crlf3Q9Z2L7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 133.7 ms