Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn6Q9Z262 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn6Q9Z262 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn6Q9Z262 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn6Q9Z262 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.41■□□□□ 0.54
Cldn6Q9Z262 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn6Q9Z262 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn6Q9Z262 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn6Q9Z262 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn6Q9Z262 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn6Q9Z262 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn6Q9Z262 Golph3-202ENSMUST00000226517 2359 ntBASIC18.4■□□□□ 0.54
Cldn6Q9Z262 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cldn6Q9Z262 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn6Q9Z262 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn6Q9Z262 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn6Q9Z262 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn6Q9Z262 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.4■□□□□ 0.54
Cldn6Q9Z262 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cldn6Q9Z262 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn6Q9Z262 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn6Q9Z262 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn6Q9Z262 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn6Q9Z262 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.39■□□□□ 0.53
Cldn6Q9Z262 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.39■□□□□ 0.53
Cldn6Q9Z262 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn6Q9Z262 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn6Q9Z262 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn6Q9Z262 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.38■□□□□ 0.53
Cldn6Q9Z262 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cldn6Q9Z262 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn6Q9Z262 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn6Q9Z262 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn6Q9Z262 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn6Q9Z262 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn6Q9Z262 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.38■□□□□ 0.53
Cldn6Q9Z262 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn6Q9Z262 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn6Q9Z262 Gm13241-201ENSMUST00000094493 780 ntBASIC18.38■□□□□ 0.53
Cldn6Q9Z262 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn6Q9Z262 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Cldn6Q9Z262 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn6Q9Z262 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cldn6Q9Z262 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.38■□□□□ 0.53
Cldn6Q9Z262 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn6Q9Z262 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn6Q9Z262 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Cldn6Q9Z262 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn6Q9Z262 Gm21956-201ENSMUST00000179946 522 ntBASIC18.37■□□□□ 0.53
Cldn6Q9Z262 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.37■□□□□ 0.53
Cldn6Q9Z262 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn6Q9Z262 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn6Q9Z262 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn6Q9Z262 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn6Q9Z262 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn6Q9Z262 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn6Q9Z262 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn6Q9Z262 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.36■□□□□ 0.53
Cldn6Q9Z262 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.36■□□□□ 0.53
Cldn6Q9Z262 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn6Q9Z262 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn6Q9Z262 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn6Q9Z262 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn6Q9Z262 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn6Q9Z262 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Cldn6Q9Z262 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cldn6Q9Z262 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn6Q9Z262 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Cldn6Q9Z262 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn6Q9Z262 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn6Q9Z262 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn6Q9Z262 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn6Q9Z262 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn6Q9Z262 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn6Q9Z262 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.35■□□□□ 0.53
Cldn6Q9Z262 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn6Q9Z262 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn6Q9Z262 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cldn6Q9Z262 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cldn6Q9Z262 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn6Q9Z262 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cldn6Q9Z262 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn6Q9Z262 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn6Q9Z262 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.34■□□□□ 0.53
Cldn6Q9Z262 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn6Q9Z262 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.34■□□□□ 0.53
Cldn6Q9Z262 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn6Q9Z262 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn6Q9Z262 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn6Q9Z262 AA386476-201ENSMUST00000098781 1665 ntBASIC18.34■□□□□ 0.53
Cldn6Q9Z262 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn6Q9Z262 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cldn6Q9Z262 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldn6Q9Z262 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldn6Q9Z262 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cldn6Q9Z262 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Cldn6Q9Z262 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldn6Q9Z262 Gm43137-201ENSMUST00000198052 594 ntBASIC18.33■□□□□ 0.52
Cldn6Q9Z262 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.33■□□□□ 0.52
Cldn6Q9Z262 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms