Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nr1h3Q9Z0Y9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nr1h3Q9Z0Y9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nr1h3Q9Z0Y9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nr1h3Q9Z0Y9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nr1h3Q9Z0Y9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nr1h3Q9Z0Y9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nr1h3Q9Z0Y9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nr1h3Q9Z0Y9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nr1h3Q9Z0Y9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nr1h3Q9Z0Y9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nr1h3Q9Z0Y9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nr1h3Q9Z0Y9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Nr1h3Q9Z0Y9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.33■■□□□ 1.01
Nr1h3Q9Z0Y9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nr1h3Q9Z0Y9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.33■■□□□ 1.01
Nr1h3Q9Z0Y9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.33■■□□□ 1.01
Nr1h3Q9Z0Y9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nr1h3Q9Z0Y9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Nr1h3Q9Z0Y9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Nr1h3Q9Z0Y9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nr1h3Q9Z0Y9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.32■■□□□ 1
Nr1h3Q9Z0Y9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nr1h3Q9Z0Y9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.32■■□□□ 1
Nr1h3Q9Z0Y9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Nr1h3Q9Z0Y9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Nr1h3Q9Z0Y9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Nr1h3Q9Z0Y9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.31■■□□□ 1
Nr1h3Q9Z0Y9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.31■■□□□ 1
Nr1h3Q9Z0Y9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nr1h3Q9Z0Y9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Nr1h3Q9Z0Y9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nr1h3Q9Z0Y9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.3■■□□□ 1
Nr1h3Q9Z0Y9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Nr1h3Q9Z0Y9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Nr1h3Q9Z0Y9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Nr1h3Q9Z0Y9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nr1h3Q9Z0Y9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.3■■□□□ 1
Nr1h3Q9Z0Y9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nr1h3Q9Z0Y9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.29■■□□□ 1
Nr1h3Q9Z0Y9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nr1h3Q9Z0Y9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nr1h3Q9Z0Y9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nr1h3Q9Z0Y9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.29■■□□□ 1
Nr1h3Q9Z0Y9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nr1h3Q9Z0Y9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.29■■□□□ 1
Nr1h3Q9Z0Y9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nr1h3Q9Z0Y9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.29■■□□□ 1
Nr1h3Q9Z0Y9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nr1h3Q9Z0Y9 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.28■■□□□ 1
Nr1h3Q9Z0Y9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.28■■□□□ 1
Nr1h3Q9Z0Y9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Nr1h3Q9Z0Y9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nr1h3Q9Z0Y9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
Nr1h3Q9Z0Y9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nr1h3Q9Z0Y9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nr1h3Q9Z0Y9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nr1h3Q9Z0Y9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nr1h3Q9Z0Y9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nr1h3Q9Z0Y9 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.27■■□□□ 1
Nr1h3Q9Z0Y9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.27■■□□□ 1
Nr1h3Q9Z0Y9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nr1h3Q9Z0Y9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nr1h3Q9Z0Y9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Nr1h3Q9Z0Y9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
Nr1h3Q9Z0Y9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1h3Q9Z0Y9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1h3Q9Z0Y9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1h3Q9Z0Y9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1h3Q9Z0Y9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1h3Q9Z0Y9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1h3Q9Z0Y9 Gm27801-201ENSMUST00000184174 223 ntBASIC21.26■□□□□ 0.99
Nr1h3Q9Z0Y9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.26■□□□□ 0.99
Nr1h3Q9Z0Y9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.26■□□□□ 0.99
Nr1h3Q9Z0Y9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.26■□□□□ 0.99
Nr1h3Q9Z0Y9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1h3Q9Z0Y9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1h3Q9Z0Y9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Nr1h3Q9Z0Y9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1h3Q9Z0Y9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1h3Q9Z0Y9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Nr1h3Q9Z0Y9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nr1h3Q9Z0Y9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nr1h3Q9Z0Y9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nr1h3Q9Z0Y9 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.25■□□□□ 0.99
Nr1h3Q9Z0Y9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.24■□□□□ 0.99
Nr1h3Q9Z0Y9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nr1h3Q9Z0Y9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nr1h3Q9Z0Y9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Nr1h3Q9Z0Y9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.24■□□□□ 0.99
Nr1h3Q9Z0Y9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.24■□□□□ 0.99
Nr1h3Q9Z0Y9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nr1h3Q9Z0Y9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.24■□□□□ 0.99
Nr1h3Q9Z0Y9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nr1h3Q9Z0Y9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nr1h3Q9Z0Y9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nr1h3Q9Z0Y9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
Nr1h3Q9Z0Y9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Nr1h3Q9Z0Y9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nr1h3Q9Z0Y9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms