Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClcnkaQ9WUB7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClcnkaQ9WUB7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClcnkaQ9WUB7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClcnkaQ9WUB7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
ClcnkaQ9WUB7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
ClcnkaQ9WUB7 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.02■□□□□ 0.48
ClcnkaQ9WUB7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ClcnkaQ9WUB7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ClcnkaQ9WUB7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.02■□□□□ 0.48
ClcnkaQ9WUB7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ClcnkaQ9WUB7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ClcnkaQ9WUB7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
ClcnkaQ9WUB7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ClcnkaQ9WUB7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClcnkaQ9WUB7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClcnkaQ9WUB7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ClcnkaQ9WUB7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClcnkaQ9WUB7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.01■□□□□ 0.47
ClcnkaQ9WUB7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClcnkaQ9WUB7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ClcnkaQ9WUB7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClcnkaQ9WUB7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClcnkaQ9WUB7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18■□□□□ 0.47
ClcnkaQ9WUB7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18■□□□□ 0.47
ClcnkaQ9WUB7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClcnkaQ9WUB7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18■□□□□ 0.47
ClcnkaQ9WUB7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18■□□□□ 0.47
ClcnkaQ9WUB7 Gm27045-201ENSMUST00000182145 1402 ntBASIC18■□□□□ 0.47
ClcnkaQ9WUB7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClcnkaQ9WUB7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18■□□□□ 0.47
ClcnkaQ9WUB7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18■□□□□ 0.47
ClcnkaQ9WUB7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
ClcnkaQ9WUB7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18■□□□□ 0.47
ClcnkaQ9WUB7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18■□□□□ 0.47
ClcnkaQ9WUB7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ClcnkaQ9WUB7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClcnkaQ9WUB7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18■□□□□ 0.47
ClcnkaQ9WUB7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClcnkaQ9WUB7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClcnkaQ9WUB7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ClcnkaQ9WUB7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ClcnkaQ9WUB7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ClcnkaQ9WUB7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ClcnkaQ9WUB7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ClcnkaQ9WUB7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ClcnkaQ9WUB7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.98■□□□□ 0.47
ClcnkaQ9WUB7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.97■□□□□ 0.47
ClcnkaQ9WUB7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClcnkaQ9WUB7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClcnkaQ9WUB7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ClcnkaQ9WUB7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClcnkaQ9WUB7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ClcnkaQ9WUB7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClcnkaQ9WUB7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClcnkaQ9WUB7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ClcnkaQ9WUB7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ClcnkaQ9WUB7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ClcnkaQ9WUB7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.96■□□□□ 0.47
ClcnkaQ9WUB7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ClcnkaQ9WUB7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ClcnkaQ9WUB7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ClcnkaQ9WUB7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.96■□□□□ 0.47
ClcnkaQ9WUB7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ClcnkaQ9WUB7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.95■□□□□ 0.46
ClcnkaQ9WUB7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClcnkaQ9WUB7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ClcnkaQ9WUB7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ClcnkaQ9WUB7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.95■□□□□ 0.46
ClcnkaQ9WUB7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ClcnkaQ9WUB7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ClcnkaQ9WUB7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
ClcnkaQ9WUB7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.95■□□□□ 0.46
ClcnkaQ9WUB7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ClcnkaQ9WUB7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
ClcnkaQ9WUB7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClcnkaQ9WUB7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClcnkaQ9WUB7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ClcnkaQ9WUB7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClcnkaQ9WUB7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms