Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Prpf40aQ9R1C7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf40aQ9R1C7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Prpf40aQ9R1C7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.54■■□□□ 1.04
Prpf40aQ9R1C7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf40aQ9R1C7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
Prpf40aQ9R1C7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf40aQ9R1C7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Prpf40aQ9R1C7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf40aQ9R1C7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf40aQ9R1C7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf40aQ9R1C7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf40aQ9R1C7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf40aQ9R1C7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf40aQ9R1C7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Prpf40aQ9R1C7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf40aQ9R1C7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf40aQ9R1C7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Prpf40aQ9R1C7 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.53■■□□□ 1.04
Prpf40aQ9R1C7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Prpf40aQ9R1C7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf40aQ9R1C7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf40aQ9R1C7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Prpf40aQ9R1C7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf40aQ9R1C7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf40aQ9R1C7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Prpf40aQ9R1C7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf40aQ9R1C7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Prpf40aQ9R1C7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.51■■□□□ 1.03
Prpf40aQ9R1C7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf40aQ9R1C7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf40aQ9R1C7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf40aQ9R1C7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf40aQ9R1C7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf40aQ9R1C7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf40aQ9R1C7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf40aQ9R1C7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf40aQ9R1C7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf40aQ9R1C7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf40aQ9R1C7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf40aQ9R1C7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf40aQ9R1C7 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.5■■□□□ 1.03
Prpf40aQ9R1C7 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.5■■□□□ 1.03
Prpf40aQ9R1C7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Prpf40aQ9R1C7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Prpf40aQ9R1C7 Iqck-206ENSMUST00000208658 2891 ntBASIC21.5■■□□□ 1.03
Prpf40aQ9R1C7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf40aQ9R1C7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Prpf40aQ9R1C7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf40aQ9R1C7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf40aQ9R1C7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf40aQ9R1C7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
Prpf40aQ9R1C7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.49■■□□□ 1.03
Prpf40aQ9R1C7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf40aQ9R1C7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Prpf40aQ9R1C7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf40aQ9R1C7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf40aQ9R1C7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf40aQ9R1C7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf40aQ9R1C7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf40aQ9R1C7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.48■■□□□ 1.03
Prpf40aQ9R1C7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.48■■□□□ 1.03
Prpf40aQ9R1C7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf40aQ9R1C7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf40aQ9R1C7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.48■■□□□ 1.03
Prpf40aQ9R1C7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
Prpf40aQ9R1C7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf40aQ9R1C7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf40aQ9R1C7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Prpf40aQ9R1C7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Prpf40aQ9R1C7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf40aQ9R1C7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf40aQ9R1C7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Prpf40aQ9R1C7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf40aQ9R1C7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf40aQ9R1C7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.47■■□□□ 1.03
Prpf40aQ9R1C7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.47■■□□□ 1.03
Prpf40aQ9R1C7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf40aQ9R1C7 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.47■■□□□ 1.03
Prpf40aQ9R1C7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf40aQ9R1C7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf40aQ9R1C7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Prpf40aQ9R1C7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf40aQ9R1C7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf40aQ9R1C7 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.46■■□□□ 1.03
Prpf40aQ9R1C7 Gm43137-201ENSMUST00000198052 594 ntBASIC21.46■■□□□ 1.03
Prpf40aQ9R1C7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf40aQ9R1C7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf40aQ9R1C7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Prpf40aQ9R1C7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
Prpf40aQ9R1C7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf40aQ9R1C7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf40aQ9R1C7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Prpf40aQ9R1C7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.45■■□□□ 1.02
Prpf40aQ9R1C7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Prpf40aQ9R1C7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.45■■□□□ 1.02
Prpf40aQ9R1C7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf40aQ9R1C7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf40aQ9R1C7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf40aQ9R1C7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms