Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nubp2Q9R061 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.32■□□□□ 0.36
Nubp2Q9R061 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.32■□□□□ 0.36
Nubp2Q9R061 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nubp2Q9R061 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nubp2Q9R061 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.32■□□□□ 0.36
Nubp2Q9R061 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.32■□□□□ 0.36
Nubp2Q9R061 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nubp2Q9R061 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nubp2Q9R061 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nubp2Q9R061 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Nubp2Q9R061 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nubp2Q9R061 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.31■□□□□ 0.36
Nubp2Q9R061 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.31■□□□□ 0.36
Nubp2Q9R061 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nubp2Q9R061 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Nubp2Q9R061 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nubp2Q9R061 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nubp2Q9R061 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nubp2Q9R061 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nubp2Q9R061 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.3■□□□□ 0.36
Nubp2Q9R061 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nubp2Q9R061 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.3■□□□□ 0.36
Nubp2Q9R061 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nubp2Q9R061 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nubp2Q9R061 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nubp2Q9R061 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nubp2Q9R061 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nubp2Q9R061 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nubp2Q9R061 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nubp2Q9R061 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.29■□□□□ 0.36
Nubp2Q9R061 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nubp2Q9R061 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nubp2Q9R061 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nubp2Q9R061 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.29■□□□□ 0.36
Nubp2Q9R061 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nubp2Q9R061 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp2Q9R061 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp2Q9R061 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp2Q9R061 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Nubp2Q9R061 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp2Q9R061 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp2Q9R061 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp2Q9R061 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp2Q9R061 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp2Q9R061 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp2Q9R061 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp2Q9R061 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp2Q9R061 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nubp2Q9R061 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nubp2Q9R061 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nubp2Q9R061 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nubp2Q9R061 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nubp2Q9R061 Gm43530-201ENSMUST00000195920 274 ntBASIC17.27■□□□□ 0.36
Nubp2Q9R061 Gm43137-201ENSMUST00000198052 594 ntBASIC17.27■□□□□ 0.36
Nubp2Q9R061 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.27■□□□□ 0.35
Nubp2Q9R061 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nubp2Q9R061 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nubp2Q9R061 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nubp2Q9R061 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nubp2Q9R061 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nubp2Q9R061 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.26■□□□□ 0.35
Nubp2Q9R061 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nubp2Q9R061 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nubp2Q9R061 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nubp2Q9R061 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nubp2Q9R061 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nubp2Q9R061 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nubp2Q9R061 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nubp2Q9R061 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nubp2Q9R061 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nubp2Q9R061 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nubp2Q9R061 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Nubp2Q9R061 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Nubp2Q9R061 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.25■□□□□ 0.35
Nubp2Q9R061 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nubp2Q9R061 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.25■□□□□ 0.35
Nubp2Q9R061 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Nubp2Q9R061 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nubp2Q9R061 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nubp2Q9R061 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nubp2Q9R061 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nubp2Q9R061 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.25■□□□□ 0.35
Nubp2Q9R061 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Nubp2Q9R061 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.24■□□□□ 0.35
Nubp2Q9R061 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms