Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom3Q9QXN0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom3Q9QXN0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom3Q9QXN0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.76■□□□□ 0.75
Shroom3Q9QXN0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom3Q9QXN0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom3Q9QXN0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom3Q9QXN0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shroom3Q9QXN0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Shroom3Q9QXN0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shroom3Q9QXN0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shroom3Q9QXN0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shroom3Q9QXN0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shroom3Q9QXN0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shroom3Q9QXN0 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.75■□□□□ 0.75
Shroom3Q9QXN0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.75■□□□□ 0.75
Shroom3Q9QXN0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shroom3Q9QXN0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shroom3Q9QXN0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 Gm26833-201ENSMUST00000180899 440 ntBASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom3Q9QXN0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shroom3Q9QXN0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Shroom3Q9QXN0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shroom3Q9QXN0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shroom3Q9QXN0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shroom3Q9QXN0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shroom3Q9QXN0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.73■□□□□ 0.75
Shroom3Q9QXN0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shroom3Q9QXN0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shroom3Q9QXN0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Shroom3Q9QXN0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Shroom3Q9QXN0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shroom3Q9QXN0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.72■□□□□ 0.75
Shroom3Q9QXN0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shroom3Q9QXN0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shroom3Q9QXN0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Shroom3Q9QXN0 Golph3-202ENSMUST00000226517 2359 ntBASIC19.72■□□□□ 0.75
Shroom3Q9QXN0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Shroom3Q9QXN0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shroom3Q9QXN0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shroom3Q9QXN0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shroom3Q9QXN0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Shroom3Q9QXN0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shroom3Q9QXN0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.71■□□□□ 0.75
Shroom3Q9QXN0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shroom3Q9QXN0 Gm7291-201ENSMUST00000199147 382 ntBASIC19.71■□□□□ 0.75
Shroom3Q9QXN0 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.71■□□□□ 0.75
Shroom3Q9QXN0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shroom3Q9QXN0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shroom3Q9QXN0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shroom3Q9QXN0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Shroom3Q9QXN0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shroom3Q9QXN0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shroom3Q9QXN0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shroom3Q9QXN0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Shroom3Q9QXN0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Shroom3Q9QXN0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.7■□□□□ 0.74
Shroom3Q9QXN0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Shroom3Q9QXN0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.7■□□□□ 0.74
Shroom3Q9QXN0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Shroom3Q9QXN0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shroom3Q9QXN0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shroom3Q9QXN0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shroom3Q9QXN0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shroom3Q9QXN0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Shroom3Q9QXN0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shroom3Q9QXN0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Shroom3Q9QXN0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shroom3Q9QXN0 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.68■□□□□ 0.74
Shroom3Q9QXN0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shroom3Q9QXN0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.68■□□□□ 0.74
Shroom3Q9QXN0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Shroom3Q9QXN0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.68■□□□□ 0.74
Shroom3Q9QXN0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shroom3Q9QXN0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Shroom3Q9QXN0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shroom3Q9QXN0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Shroom3Q9QXN0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.68■□□□□ 0.74
Shroom3Q9QXN0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.68■□□□□ 0.74
Shroom3Q9QXN0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Shroom3Q9QXN0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shroom3Q9QXN0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom3Q9QXN0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms