Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Crlf1Q9JM58 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Crlf1Q9JM58 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC15.84■□□□□ 0.13
Crlf1Q9JM58 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
Crlf1Q9JM58 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC15.83■□□□□ 0.12
Crlf1Q9JM58 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Crlf1Q9JM58 Gm6576-201ENSMUST00000169678 883 ntBASIC15.83■□□□□ 0.12
Crlf1Q9JM58 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.83■□□□□ 0.12
Crlf1Q9JM58 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.83■□□□□ 0.12
Crlf1Q9JM58 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Crlf1Q9JM58 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Crlf1Q9JM58 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Crlf1Q9JM58 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Crlf1Q9JM58 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Crlf1Q9JM58 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Crlf1Q9JM58 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Crlf1Q9JM58 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Crlf1Q9JM58 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Crlf1Q9JM58 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Crlf1Q9JM58 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.81■□□□□ 0.12
Crlf1Q9JM58 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Crlf1Q9JM58 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Crlf1Q9JM58 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Crlf1Q9JM58 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Crlf1Q9JM58 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Crlf1Q9JM58 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Crlf1Q9JM58 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Crlf1Q9JM58 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Crlf1Q9JM58 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Crlf1Q9JM58 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Crlf1Q9JM58 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Crlf1Q9JM58 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Crlf1Q9JM58 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Crlf1Q9JM58 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Crlf1Q9JM58 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.8■□□□□ 0.12
Crlf1Q9JM58 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Crlf1Q9JM58 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Crlf1Q9JM58 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.8■□□□□ 0.12
Crlf1Q9JM58 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.8■□□□□ 0.12
Crlf1Q9JM58 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.8■□□□□ 0.12
Crlf1Q9JM58 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.8■□□□□ 0.12
Crlf1Q9JM58 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Crlf1Q9JM58 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Crlf1Q9JM58 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Crlf1Q9JM58 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Crlf1Q9JM58 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Crlf1Q9JM58 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Crlf1Q9JM58 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Crlf1Q9JM58 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Crlf1Q9JM58 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Crlf1Q9JM58 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Crlf1Q9JM58 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.78■□□□□ 0.12
Crlf1Q9JM58 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.78■□□□□ 0.12
Crlf1Q9JM58 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Crlf1Q9JM58 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.78■□□□□ 0.12
Crlf1Q9JM58 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Crlf1Q9JM58 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Crlf1Q9JM58 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Crlf1Q9JM58 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Crlf1Q9JM58 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Crlf1Q9JM58 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Crlf1Q9JM58 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.78■□□□□ 0.12
Crlf1Q9JM58 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Crlf1Q9JM58 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Crlf1Q9JM58 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Crlf1Q9JM58 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Crlf1Q9JM58 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Crlf1Q9JM58 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Crlf1Q9JM58 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Crlf1Q9JM58 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.77■□□□□ 0.12
Crlf1Q9JM58 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Crlf1Q9JM58 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Crlf1Q9JM58 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.77■□□□□ 0.12
Crlf1Q9JM58 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Crlf1Q9JM58 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.77■□□□□ 0.11
Crlf1Q9JM58 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Crlf1Q9JM58 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.76■□□□□ 0.11
Crlf1Q9JM58 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Crlf1Q9JM58 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.76■□□□□ 0.11
Crlf1Q9JM58 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Crlf1Q9JM58 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Crlf1Q9JM58 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms