Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbfox1Q9JJ43 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbfox1Q9JJ43 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbfox1Q9JJ43 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rbfox1Q9JJ43 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rbfox1Q9JJ43 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbfox1Q9JJ43 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rbfox1Q9JJ43 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbfox1Q9JJ43 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbfox1Q9JJ43 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbfox1Q9JJ43 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbfox1Q9JJ43 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbfox1Q9JJ43 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.67■□□□□ 0.26
Rbfox1Q9JJ43 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbfox1Q9JJ43 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rbfox1Q9JJ43 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rbfox1Q9JJ43 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.67■□□□□ 0.26
Rbfox1Q9JJ43 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rbfox1Q9JJ43 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rbfox1Q9JJ43 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.67■□□□□ 0.26
Rbfox1Q9JJ43 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbfox1Q9JJ43 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbfox1Q9JJ43 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rbfox1Q9JJ43 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rbfox1Q9JJ43 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbfox1Q9JJ43 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.66■□□□□ 0.26
Rbfox1Q9JJ43 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.66■□□□□ 0.26
Rbfox1Q9JJ43 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.66■□□□□ 0.26
Rbfox1Q9JJ43 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.66■□□□□ 0.26
Rbfox1Q9JJ43 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rbfox1Q9JJ43 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.66■□□□□ 0.26
Rbfox1Q9JJ43 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rbfox1Q9JJ43 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rbfox1Q9JJ43 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rbfox1Q9JJ43 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.66■□□□□ 0.26
Rbfox1Q9JJ43 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rbfox1Q9JJ43 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
Rbfox1Q9JJ43 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rbfox1Q9JJ43 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rbfox1Q9JJ43 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rbfox1Q9JJ43 Gm15820-201ENSMUST00000201566 728 ntBASIC16.65■□□□□ 0.26
Rbfox1Q9JJ43 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rbfox1Q9JJ43 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rbfox1Q9JJ43 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rbfox1Q9JJ43 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rbfox1Q9JJ43 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.64■□□□□ 0.26
Rbfox1Q9JJ43 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbfox1Q9JJ43 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbfox1Q9JJ43 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.64■□□□□ 0.25
Rbfox1Q9JJ43 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbfox1Q9JJ43 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbfox1Q9JJ43 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbfox1Q9JJ43 Gm5812-201ENSMUST00000061073 957 ntBASIC16.64■□□□□ 0.25
Rbfox1Q9JJ43 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbfox1Q9JJ43 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbfox1Q9JJ43 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbfox1Q9JJ43 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbfox1Q9JJ43 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rbfox1Q9JJ43 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbfox1Q9JJ43 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbfox1Q9JJ43 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Rbfox1Q9JJ43 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbfox1Q9JJ43 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rbfox1Q9JJ43 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbfox1Q9JJ43 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Rbfox1Q9JJ43 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.63■□□□□ 0.25
Rbfox1Q9JJ43 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbfox1Q9JJ43 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rbfox1Q9JJ43 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbfox1Q9JJ43 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbfox1Q9JJ43 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbfox1Q9JJ43 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbfox1Q9JJ43 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbfox1Q9JJ43 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rbfox1Q9JJ43 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbfox1Q9JJ43 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbfox1Q9JJ43 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbfox1Q9JJ43 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.62■□□□□ 0.25
Rbfox1Q9JJ43 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbfox1Q9JJ43 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbfox1Q9JJ43 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbfox1Q9JJ43 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbfox1Q9JJ43 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rbfox1Q9JJ43 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbfox1Q9JJ43 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbfox1Q9JJ43 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbfox1Q9JJ43 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbfox1Q9JJ43 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbfox1Q9JJ43 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Rbfox1Q9JJ43 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbfox1Q9JJ43 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbfox1Q9JJ43 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rbfox1Q9JJ43 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rbfox1Q9JJ43 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rbfox1Q9JJ43 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Rbfox1Q9JJ43 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
Rbfox1Q9JJ43 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rbfox1Q9JJ43 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbfox1Q9JJ43 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbfox1Q9JJ43 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms