Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nif3l1Q9EQ80 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nif3l1Q9EQ80 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Nif3l1Q9EQ80 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Nif3l1Q9EQ80 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nif3l1Q9EQ80 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nif3l1Q9EQ80 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nif3l1Q9EQ80 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Nif3l1Q9EQ80 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nif3l1Q9EQ80 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nif3l1Q9EQ80 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Nif3l1Q9EQ80 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nif3l1Q9EQ80 Gm12251-201ENSMUST00000117893 792 ntBASIC19.5■□□□□ 0.71
Nif3l1Q9EQ80 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nif3l1Q9EQ80 Mir7075-201ENSMUST00000184187 82 ntBASIC19.5■□□□□ 0.71
Nif3l1Q9EQ80 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.5■□□□□ 0.71
Nif3l1Q9EQ80 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nif3l1Q9EQ80 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nif3l1Q9EQ80 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nif3l1Q9EQ80 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nif3l1Q9EQ80 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nif3l1Q9EQ80 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nif3l1Q9EQ80 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.5■□□□□ 0.71
Nif3l1Q9EQ80 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.49■□□□□ 0.71
Nif3l1Q9EQ80 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Nif3l1Q9EQ80 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nif3l1Q9EQ80 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nif3l1Q9EQ80 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nif3l1Q9EQ80 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Nif3l1Q9EQ80 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nif3l1Q9EQ80 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nif3l1Q9EQ80 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nif3l1Q9EQ80 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nif3l1Q9EQ80 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Nif3l1Q9EQ80 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nif3l1Q9EQ80 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nif3l1Q9EQ80 Gm45417-201ENSMUST00000209533 758 ntBASIC19.48■□□□□ 0.71
Nif3l1Q9EQ80 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.48■□□□□ 0.71
Nif3l1Q9EQ80 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nif3l1Q9EQ80 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.48■□□□□ 0.71
Nif3l1Q9EQ80 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nif3l1Q9EQ80 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nif3l1Q9EQ80 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nif3l1Q9EQ80 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nif3l1Q9EQ80 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nif3l1Q9EQ80 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nif3l1Q9EQ80 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nif3l1Q9EQ80 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nif3l1Q9EQ80 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nif3l1Q9EQ80 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nif3l1Q9EQ80 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nif3l1Q9EQ80 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Nif3l1Q9EQ80 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.47■□□□□ 0.71
Nif3l1Q9EQ80 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nif3l1Q9EQ80 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.47■□□□□ 0.71
Nif3l1Q9EQ80 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nif3l1Q9EQ80 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nif3l1Q9EQ80 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Nif3l1Q9EQ80 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nif3l1Q9EQ80 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nif3l1Q9EQ80 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nif3l1Q9EQ80 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nif3l1Q9EQ80 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Nif3l1Q9EQ80 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nif3l1Q9EQ80 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nif3l1Q9EQ80 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Nif3l1Q9EQ80 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nif3l1Q9EQ80 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.46■□□□□ 0.71
Nif3l1Q9EQ80 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nif3l1Q9EQ80 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nif3l1Q9EQ80 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Nif3l1Q9EQ80 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nif3l1Q9EQ80 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nif3l1Q9EQ80 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nif3l1Q9EQ80 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nif3l1Q9EQ80 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nif3l1Q9EQ80 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nif3l1Q9EQ80 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.45■□□□□ 0.7
Nif3l1Q9EQ80 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nif3l1Q9EQ80 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nif3l1Q9EQ80 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nif3l1Q9EQ80 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nif3l1Q9EQ80 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Nif3l1Q9EQ80 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.44■□□□□ 0.7
Nif3l1Q9EQ80 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Nif3l1Q9EQ80 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.44■□□□□ 0.7
Nif3l1Q9EQ80 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nif3l1Q9EQ80 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nif3l1Q9EQ80 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nif3l1Q9EQ80 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nif3l1Q9EQ80 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.44■□□□□ 0.7
Nif3l1Q9EQ80 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nif3l1Q9EQ80 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.43■□□□□ 0.7
Nif3l1Q9EQ80 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nif3l1Q9EQ80 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nif3l1Q9EQ80 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nif3l1Q9EQ80 Gm8493-201ENSMUST00000196881 489 ntBASIC19.43■□□□□ 0.7
Nif3l1Q9EQ80 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.43■□□□□ 0.7
Nif3l1Q9EQ80 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nif3l1Q9EQ80 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 111.1 ms