Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn3Q9DCB1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn3Q9DCB1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn3Q9DCB1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn3Q9DCB1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn3Q9DCB1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgn3Q9DCB1 Mir6538-201ENSMUST00000183713 110 ntBASIC18.4■□□□□ 0.54
Hmgn3Q9DCB1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgn3Q9DCB1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgn3Q9DCB1 Grk6-206ENSMUST00000224995 2971 ntBASIC18.4■□□□□ 0.54
Hmgn3Q9DCB1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgn3Q9DCB1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgn3Q9DCB1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgn3Q9DCB1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Hmgn3Q9DCB1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hmgn3Q9DCB1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgn3Q9DCB1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgn3Q9DCB1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgn3Q9DCB1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgn3Q9DCB1 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.39■□□□□ 0.53
Hmgn3Q9DCB1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.39■□□□□ 0.53
Hmgn3Q9DCB1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Hmgn3Q9DCB1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Hmgn3Q9DCB1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgn3Q9DCB1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgn3Q9DCB1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgn3Q9DCB1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgn3Q9DCB1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgn3Q9DCB1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgn3Q9DCB1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Hmgn3Q9DCB1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Hmgn3Q9DCB1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgn3Q9DCB1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgn3Q9DCB1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgn3Q9DCB1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Hmgn3Q9DCB1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgn3Q9DCB1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgn3Q9DCB1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Hmgn3Q9DCB1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgn3Q9DCB1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.38■□□□□ 0.53
Hmgn3Q9DCB1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgn3Q9DCB1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgn3Q9DCB1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgn3Q9DCB1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgn3Q9DCB1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgn3Q9DCB1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Hmgn3Q9DCB1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgn3Q9DCB1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgn3Q9DCB1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgn3Q9DCB1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgn3Q9DCB1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgn3Q9DCB1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgn3Q9DCB1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.37■□□□□ 0.53
Hmgn3Q9DCB1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Hmgn3Q9DCB1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgn3Q9DCB1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgn3Q9DCB1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Hmgn3Q9DCB1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgn3Q9DCB1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgn3Q9DCB1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgn3Q9DCB1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgn3Q9DCB1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.37■□□□□ 0.53
Hmgn3Q9DCB1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgn3Q9DCB1 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.37■□□□□ 0.53
Hmgn3Q9DCB1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.36■□□□□ 0.53
Hmgn3Q9DCB1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgn3Q9DCB1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Hmgn3Q9DCB1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Hmgn3Q9DCB1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgn3Q9DCB1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgn3Q9DCB1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgn3Q9DCB1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgn3Q9DCB1 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.36■□□□□ 0.53
Hmgn3Q9DCB1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgn3Q9DCB1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgn3Q9DCB1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgn3Q9DCB1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Hmgn3Q9DCB1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgn3Q9DCB1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgn3Q9DCB1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgn3Q9DCB1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgn3Q9DCB1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgn3Q9DCB1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.35■□□□□ 0.53
Hmgn3Q9DCB1 Gm12366-201ENSMUST00000121722 873 ntBASIC18.35■□□□□ 0.53
Hmgn3Q9DCB1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.35■□□□□ 0.53
Hmgn3Q9DCB1 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.35■□□□□ 0.53
Hmgn3Q9DCB1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.35■□□□□ 0.53
Hmgn3Q9DCB1 Gm5786-201ENSMUST00000085368 882 ntBASIC18.35■□□□□ 0.53
Hmgn3Q9DCB1 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.35■□□□□ 0.53
Hmgn3Q9DCB1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgn3Q9DCB1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgn3Q9DCB1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgn3Q9DCB1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgn3Q9DCB1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgn3Q9DCB1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgn3Q9DCB1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgn3Q9DCB1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgn3Q9DCB1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgn3Q9DCB1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgn3Q9DCB1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms