Protein–RNA interactions for Protein: Q9DBC3

Cmtr1, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1, mousemouse

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmtr1Q9DBC3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Cmtr1Q9DBC3 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.29■■□□□ 1
Cmtr1Q9DBC3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cmtr1Q9DBC3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cmtr1Q9DBC3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cmtr1Q9DBC3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.29■■□□□ 1
Cmtr1Q9DBC3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cmtr1Q9DBC3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cmtr1Q9DBC3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Cmtr1Q9DBC3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Cmtr1Q9DBC3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Cmtr1Q9DBC3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.28■■□□□ 1
Cmtr1Q9DBC3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Cmtr1Q9DBC3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.28■■□□□ 1
Cmtr1Q9DBC3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cmtr1Q9DBC3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cmtr1Q9DBC3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cmtr1Q9DBC3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Cmtr1Q9DBC3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Cmtr1Q9DBC3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cmtr1Q9DBC3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Cmtr1Q9DBC3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cmtr1Q9DBC3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.27■□□□□ 0.99
Cmtr1Q9DBC3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.27■□□□□ 0.99
Cmtr1Q9DBC3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Cmtr1Q9DBC3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
Cmtr1Q9DBC3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cmtr1Q9DBC3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cmtr1Q9DBC3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.26■□□□□ 0.99
Cmtr1Q9DBC3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Cmtr1Q9DBC3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cmtr1Q9DBC3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cmtr1Q9DBC3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cmtr1Q9DBC3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Cmtr1Q9DBC3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cmtr1Q9DBC3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cmtr1Q9DBC3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.25■□□□□ 0.99
Cmtr1Q9DBC3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cmtr1Q9DBC3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.25■□□□□ 0.99
Cmtr1Q9DBC3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cmtr1Q9DBC3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cmtr1Q9DBC3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.24■□□□□ 0.99
Cmtr1Q9DBC3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.24■□□□□ 0.99
Cmtr1Q9DBC3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cmtr1Q9DBC3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Cmtr1Q9DBC3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cmtr1Q9DBC3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cmtr1Q9DBC3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Cmtr1Q9DBC3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cmtr1Q9DBC3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cmtr1Q9DBC3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cmtr1Q9DBC3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cmtr1Q9DBC3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cmtr1Q9DBC3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cmtr1Q9DBC3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Cmtr1Q9DBC3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cmtr1Q9DBC3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cmtr1Q9DBC3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cmtr1Q9DBC3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.22■□□□□ 0.99
Cmtr1Q9DBC3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cmtr1Q9DBC3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cmtr1Q9DBC3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cmtr1Q9DBC3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Cmtr1Q9DBC3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cmtr1Q9DBC3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cmtr1Q9DBC3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cmtr1Q9DBC3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cmtr1Q9DBC3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cmtr1Q9DBC3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cmtr1Q9DBC3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Cmtr1Q9DBC3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.21■□□□□ 0.99
Cmtr1Q9DBC3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.21■□□□□ 0.99
Cmtr1Q9DBC3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
Cmtr1Q9DBC3 Golgb1-201ENSMUST00000023534 498 ntBASIC21.21■□□□□ 0.99
Cmtr1Q9DBC3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cmtr1Q9DBC3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cmtr1Q9DBC3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cmtr1Q9DBC3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cmtr1Q9DBC3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cmtr1Q9DBC3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Cmtr1Q9DBC3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cmtr1Q9DBC3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cmtr1Q9DBC3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cmtr1Q9DBC3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Cmtr1Q9DBC3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cmtr1Q9DBC3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cmtr1Q9DBC3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cmtr1Q9DBC3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.19■□□□□ 0.98
Cmtr1Q9DBC3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.19■□□□□ 0.98
Cmtr1Q9DBC3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.19■□□□□ 0.98
Cmtr1Q9DBC3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cmtr1Q9DBC3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Cmtr1Q9DBC3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cmtr1Q9DBC3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cmtr1Q9DBC3 Gm12922-201ENSMUST00000120626 809 ntBASIC21.18■□□□□ 0.98
Cmtr1Q9DBC3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cmtr1Q9DBC3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cmtr1Q9DBC3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cmtr1Q9DBC3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cmtr1Q9DBC3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms