Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Spcs1-204ENSMUST00000226782 949 ntBASIC20.45■□□□□ 0.86
Chmp2aQ9DB34 Gm6139-201ENSMUST00000079261 882 ntBASIC20.45■□□□□ 0.86
Chmp2aQ9DB34 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chmp2aQ9DB34 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chmp2aQ9DB34 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chmp2aQ9DB34 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chmp2aQ9DB34 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.45■□□□□ 0.86
Chmp2aQ9DB34 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
Chmp2aQ9DB34 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp2aQ9DB34 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.44■□□□□ 0.86
Chmp2aQ9DB34 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp2aQ9DB34 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Chmp2aQ9DB34 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp2aQ9DB34 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.44■□□□□ 0.86
Chmp2aQ9DB34 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp2aQ9DB34 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp2aQ9DB34 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.44■□□□□ 0.86
Chmp2aQ9DB34 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.44■□□□□ 0.86
Chmp2aQ9DB34 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Chmp2aQ9DB34 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp2aQ9DB34 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp2aQ9DB34 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp2aQ9DB34 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp2aQ9DB34 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp2aQ9DB34 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp2aQ9DB34 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp2aQ9DB34 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp2aQ9DB34 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Chmp2aQ9DB34 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp2aQ9DB34 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp2aQ9DB34 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Chmp2aQ9DB34 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp2aQ9DB34 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
Chmp2aQ9DB34 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp2aQ9DB34 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp2aQ9DB34 Gm43017-201ENSMUST00000198296 752 ntBASIC20.42■□□□□ 0.86
Chmp2aQ9DB34 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.42■□□□□ 0.86
Chmp2aQ9DB34 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.42■□□□□ 0.86
Chmp2aQ9DB34 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp2aQ9DB34 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.42■□□□□ 0.86
Chmp2aQ9DB34 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp2aQ9DB34 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp2aQ9DB34 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp2aQ9DB34 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp2aQ9DB34 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp2aQ9DB34 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.41■□□□□ 0.86
Chmp2aQ9DB34 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp2aQ9DB34 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp2aQ9DB34 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp2aQ9DB34 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp2aQ9DB34 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Chmp2aQ9DB34 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp2aQ9DB34 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.41■□□□□ 0.86
Chmp2aQ9DB34 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Chmp2aQ9DB34 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp2aQ9DB34 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Chmp2aQ9DB34 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp2aQ9DB34 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp2aQ9DB34 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp2aQ9DB34 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Chmp2aQ9DB34 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Chmp2aQ9DB34 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.4■□□□□ 0.86
Chmp2aQ9DB34 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.4■□□□□ 0.86
Chmp2aQ9DB34 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp2aQ9DB34 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp2aQ9DB34 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp2aQ9DB34 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chmp2aQ9DB34 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.39■□□□□ 0.85
Chmp2aQ9DB34 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp2aQ9DB34 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp2aQ9DB34 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp2aQ9DB34 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Chmp2aQ9DB34 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.39■□□□□ 0.85
Chmp2aQ9DB34 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp2aQ9DB34 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp2aQ9DB34 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.39■□□□□ 0.85
Chmp2aQ9DB34 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Chmp2aQ9DB34 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp2aQ9DB34 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Chmp2aQ9DB34 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp2aQ9DB34 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp2aQ9DB34 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp2aQ9DB34 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Chmp2aQ9DB34 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp2aQ9DB34 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp2aQ9DB34 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp2aQ9DB34 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Chmp2aQ9DB34 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp2aQ9DB34 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Chmp2aQ9DB34 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp2aQ9DB34 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp2aQ9DB34 Gm43173-201ENSMUST00000202246 593 ntBASIC20.37■□□□□ 0.85
Chmp2aQ9DB34 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp2aQ9DB34 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp2aQ9DB34 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Chmp2aQ9DB34 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp2aQ9DB34 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
Chmp2aQ9DB34 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Chmp2aQ9DB34 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.36■□□□□ 0.85
Chmp2aQ9DB34 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms