Protein–RNA interactions for Protein: Q9D9H8

UPF0565 protein C2orf69 homolog, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9D9H8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC27.35■■□□□ 1.97
Q9D9H8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Q9D9H8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Q9D9H8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Q9D9H8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Q9D9H8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Q9D9H8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Q9D9H8 Gm42911-201ENSMUST00000199360 1630 ntBASIC27.34■■□□□ 1.97
Q9D9H8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Q9D9H8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC27.33■■□□□ 1.97
Q9D9H8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Q9D9H8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
Q9D9H8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Q9D9H8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC27.33■■□□□ 1.97
Q9D9H8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
Q9D9H8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC27.33■■□□□ 1.97
Q9D9H8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC27.33■■□□□ 1.97
Q9D9H8 Gm5408-201ENSMUST00000197998 747 ntBASIC27.33■■□□□ 1.97
Q9D9H8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC27.33■■□□□ 1.97
Q9D9H8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Q9D9H8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Q9D9H8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
Q9D9H8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Q9D9H8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Q9D9H8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC27.32■■□□□ 1.96
Q9D9H8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Q9D9H8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Q9D9H8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Q9D9H8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Q9D9H8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Q9D9H8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC27.31■■□□□ 1.96
Q9D9H8 Gm7290-201ENSMUST00000104990 617 ntBASIC27.31■■□□□ 1.96
Q9D9H8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC27.31■■□□□ 1.96
Q9D9H8 Gm12918-201ENSMUST00000120234 636 ntBASIC27.31■■□□□ 1.96
Q9D9H8 Gm15710-201ENSMUST00000121821 636 ntBASIC27.31■■□□□ 1.96
Q9D9H8 Gm5075-201ENSMUST00000196916 622 ntBASIC27.31■■□□□ 1.96
Q9D9H8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC27.31■■□□□ 1.96
Q9D9H8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC27.31■■□□□ 1.96
Q9D9H8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Q9D9H8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Q9D9H8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Q9D9H8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC27.3■■□□□ 1.96
Q9D9H8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC27.3■■□□□ 1.96
Q9D9H8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
Q9D9H8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Q9D9H8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Q9D9H8 Gm8520-201ENSMUST00000186517 868 ntBASIC27.29■■□□□ 1.96
Q9D9H8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Q9D9H8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Q9D9H8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Q9D9H8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Q9D9H8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Q9D9H8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
Q9D9H8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
Q9D9H8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Q9D9H8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC27.28■■□□□ 1.96
Q9D9H8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Q9D9H8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC27.27■■□□□ 1.96
Q9D9H8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Q9D9H8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Q9D9H8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC27.27■■□□□ 1.96
Q9D9H8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Q9D9H8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Q9D9H8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Q9D9H8 Gm20049-201ENSMUST00000219950 730 ntBASIC27.26■■□□□ 1.95
Q9D9H8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Q9D9H8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Q9D9H8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Q9D9H8 Gm10655-201ENSMUST00000098658 1397 ntBASIC27.25■■□□□ 1.95
Q9D9H8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
Q9D9H8 Gm13534-201ENSMUST00000121169 513 ntBASIC27.25■■□□□ 1.95
Q9D9H8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Q9D9H8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Q9D9H8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Q9D9H8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Q9D9H8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Q9D9H8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Q9D9H8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Q9D9H8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
Q9D9H8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Q9D9H8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Q9D9H8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Q9D9H8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Q9D9H8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Q9D9H8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Q9D9H8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
Q9D9H8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC27.23■■□□□ 1.95
Q9D9H8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC27.23■■□□□ 1.95
Q9D9H8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Q9D9H8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Q9D9H8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC27.22■■□□□ 1.95
Q9D9H8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Q9D9H8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Q9D9H8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Q9D9H8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Q9D9H8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Q9D9H8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Q9D9H8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Q9D9H8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC27.21■■□□□ 1.95
Q9D9H8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms