Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Gm3404Q9D506 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3404Q9D506 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3404Q9D506 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Gm3404Q9D506 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3404Q9D506 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3404Q9D506 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Gm3404Q9D506 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3404Q9D506 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3404Q9D506 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Gm3404Q9D506 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.84■□□□□ 0.93
Gm3404Q9D506 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3404Q9D506 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3404Q9D506 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3404Q9D506 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3404Q9D506 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Gm3404Q9D506 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm3404Q9D506 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm3404Q9D506 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Gm3404Q9D506 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gm3404Q9D506 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gm3404Q9D506 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.83■□□□□ 0.92
Gm3404Q9D506 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gm3404Q9D506 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.82■□□□□ 0.92
Gm3404Q9D506 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.82■□□□□ 0.92
Gm3404Q9D506 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.82■□□□□ 0.92
Gm3404Q9D506 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.82■□□□□ 0.92
Gm3404Q9D506 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3404Q9D506 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
Gm3404Q9D506 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3404Q9D506 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3404Q9D506 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3404Q9D506 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3404Q9D506 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.81■□□□□ 0.92
Gm3404Q9D506 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3404Q9D506 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3404Q9D506 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.81■□□□□ 0.92
Gm3404Q9D506 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3404Q9D506 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3404Q9D506 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Gm3404Q9D506 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.8■□□□□ 0.92
Gm3404Q9D506 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3404Q9D506 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Gm3404Q9D506 Gm43017-201ENSMUST00000198296 752 ntBASIC20.8■□□□□ 0.92
Gm3404Q9D506 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3404Q9D506 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Gm3404Q9D506 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3404Q9D506 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3404Q9D506 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Gm3404Q9D506 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3404Q9D506 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3404Q9D506 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3404Q9D506 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3404Q9D506 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3404Q9D506 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.79■□□□□ 0.92
Gm3404Q9D506 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3404Q9D506 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3404Q9D506 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Gm3404Q9D506 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Gm3404Q9D506 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3404Q9D506 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3404Q9D506 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Gm3404Q9D506 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Gm3404Q9D506 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.78■□□□□ 0.92
Gm3404Q9D506 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3404Q9D506 Gm43173-201ENSMUST00000202246 593 ntBASIC20.78■□□□□ 0.92
Gm3404Q9D506 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3404Q9D506 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3404Q9D506 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3404Q9D506 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3404Q9D506 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3404Q9D506 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3404Q9D506 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3404Q9D506 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3404Q9D506 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm3404Q9D506 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3404Q9D506 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Gm3404Q9D506 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3404Q9D506 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3404Q9D506 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.76■□□□□ 0.91
Gm3404Q9D506 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Gm3404Q9D506 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 141 ms