Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shmt2Q9CZN7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shmt2Q9CZN7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.71■□□□□ 0.59
Shmt2Q9CZN7 Golph3-205ENSMUST00000228671 2842 ntBASIC18.71■□□□□ 0.59
Shmt2Q9CZN7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shmt2Q9CZN7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Shmt2Q9CZN7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shmt2Q9CZN7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shmt2Q9CZN7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Shmt2Q9CZN7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Shmt2Q9CZN7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shmt2Q9CZN7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.7■□□□□ 0.58
Shmt2Q9CZN7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shmt2Q9CZN7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shmt2Q9CZN7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shmt2Q9CZN7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shmt2Q9CZN7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Shmt2Q9CZN7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shmt2Q9CZN7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Shmt2Q9CZN7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shmt2Q9CZN7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shmt2Q9CZN7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.68■□□□□ 0.58
Shmt2Q9CZN7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shmt2Q9CZN7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shmt2Q9CZN7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shmt2Q9CZN7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shmt2Q9CZN7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Shmt2Q9CZN7 Gm43530-201ENSMUST00000195920 274 ntBASIC18.68■□□□□ 0.58
Shmt2Q9CZN7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.68■□□□□ 0.58
Shmt2Q9CZN7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shmt2Q9CZN7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shmt2Q9CZN7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shmt2Q9CZN7 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.68■□□□□ 0.58
Shmt2Q9CZN7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.67■□□□□ 0.58
Shmt2Q9CZN7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shmt2Q9CZN7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Shmt2Q9CZN7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.67■□□□□ 0.58
Shmt2Q9CZN7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.67■□□□□ 0.58
Shmt2Q9CZN7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Shmt2Q9CZN7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Shmt2Q9CZN7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Shmt2Q9CZN7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shmt2Q9CZN7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.66■□□□□ 0.58
Shmt2Q9CZN7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shmt2Q9CZN7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
Shmt2Q9CZN7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.66■□□□□ 0.58
Shmt2Q9CZN7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shmt2Q9CZN7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shmt2Q9CZN7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shmt2Q9CZN7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shmt2Q9CZN7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
Shmt2Q9CZN7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.66■□□□□ 0.58
Shmt2Q9CZN7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Shmt2Q9CZN7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Shmt2Q9CZN7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shmt2Q9CZN7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shmt2Q9CZN7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shmt2Q9CZN7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shmt2Q9CZN7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Shmt2Q9CZN7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Shmt2Q9CZN7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shmt2Q9CZN7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shmt2Q9CZN7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.65■□□□□ 0.58
Shmt2Q9CZN7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shmt2Q9CZN7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.65■□□□□ 0.58
Shmt2Q9CZN7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shmt2Q9CZN7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shmt2Q9CZN7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shmt2Q9CZN7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shmt2Q9CZN7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shmt2Q9CZN7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.64■□□□□ 0.57
Shmt2Q9CZN7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Shmt2Q9CZN7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shmt2Q9CZN7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Shmt2Q9CZN7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shmt2Q9CZN7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shmt2Q9CZN7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Shmt2Q9CZN7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shmt2Q9CZN7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shmt2Q9CZN7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shmt2Q9CZN7 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.63■□□□□ 0.57
Shmt2Q9CZN7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shmt2Q9CZN7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shmt2Q9CZN7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shmt2Q9CZN7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Shmt2Q9CZN7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shmt2Q9CZN7 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.63■□□□□ 0.57
Shmt2Q9CZN7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shmt2Q9CZN7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shmt2Q9CZN7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shmt2Q9CZN7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Shmt2Q9CZN7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shmt2Q9CZN7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shmt2Q9CZN7 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.62■□□□□ 0.57
Shmt2Q9CZN7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Shmt2Q9CZN7 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.62■□□□□ 0.57
Shmt2Q9CZN7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.62■□□□□ 0.57
Shmt2Q9CZN7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shmt2Q9CZN7 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.62■□□□□ 0.57
Shmt2Q9CZN7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms