Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim13Q9CYB0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim13Q9CYB0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.09■□□□□ 0.49
Trim13Q9CYB0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.09■□□□□ 0.49
Trim13Q9CYB0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim13Q9CYB0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.09■□□□□ 0.49
Trim13Q9CYB0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim13Q9CYB0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.09■□□□□ 0.49
Trim13Q9CYB0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim13Q9CYB0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.09■□□□□ 0.49
Trim13Q9CYB0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim13Q9CYB0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim13Q9CYB0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim13Q9CYB0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim13Q9CYB0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trim13Q9CYB0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim13Q9CYB0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim13Q9CYB0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim13Q9CYB0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim13Q9CYB0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim13Q9CYB0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trim13Q9CYB0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim13Q9CYB0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim13Q9CYB0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim13Q9CYB0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim13Q9CYB0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.08■□□□□ 0.48
Trim13Q9CYB0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim13Q9CYB0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim13Q9CYB0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trim13Q9CYB0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim13Q9CYB0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim13Q9CYB0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim13Q9CYB0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.07■□□□□ 0.48
Trim13Q9CYB0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trim13Q9CYB0 Gm45444-201ENSMUST00000211394 898 ntBASIC18.07■□□□□ 0.48
Trim13Q9CYB0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim13Q9CYB0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim13Q9CYB0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim13Q9CYB0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim13Q9CYB0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim13Q9CYB0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim13Q9CYB0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim13Q9CYB0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim13Q9CYB0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim13Q9CYB0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim13Q9CYB0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim13Q9CYB0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trim13Q9CYB0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim13Q9CYB0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim13Q9CYB0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim13Q9CYB0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim13Q9CYB0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim13Q9CYB0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Trim13Q9CYB0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim13Q9CYB0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim13Q9CYB0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim13Q9CYB0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim13Q9CYB0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim13Q9CYB0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim13Q9CYB0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim13Q9CYB0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim13Q9CYB0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim13Q9CYB0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim13Q9CYB0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim13Q9CYB0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim13Q9CYB0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim13Q9CYB0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim13Q9CYB0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim13Q9CYB0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim13Q9CYB0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim13Q9CYB0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim13Q9CYB0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim13Q9CYB0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim13Q9CYB0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trim13Q9CYB0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trim13Q9CYB0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim13Q9CYB0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.04■□□□□ 0.48
Trim13Q9CYB0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.04■□□□□ 0.48
Trim13Q9CYB0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim13Q9CYB0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim13Q9CYB0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim13Q9CYB0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Trim13Q9CYB0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim13Q9CYB0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim13Q9CYB0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim13Q9CYB0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms