Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.56■□□□□ 0.72
Ssu72Q9CY97 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssu72Q9CY97 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ssu72Q9CY97 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssu72Q9CY97 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ssu72Q9CY97 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Ssu72Q9CY97 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.55■□□□□ 0.72
Ssu72Q9CY97 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.55■□□□□ 0.72
Ssu72Q9CY97 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssu72Q9CY97 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.55■□□□□ 0.72
Ssu72Q9CY97 Gm43530-201ENSMUST00000195920 274 ntBASIC19.55■□□□□ 0.72
Ssu72Q9CY97 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Ssu72Q9CY97 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssu72Q9CY97 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssu72Q9CY97 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssu72Q9CY97 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssu72Q9CY97 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssu72Q9CY97 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssu72Q9CY97 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.54■□□□□ 0.72
Ssu72Q9CY97 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssu72Q9CY97 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssu72Q9CY97 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ssu72Q9CY97 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssu72Q9CY97 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssu72Q9CY97 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssu72Q9CY97 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.53■□□□□ 0.72
Ssu72Q9CY97 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssu72Q9CY97 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Ssu72Q9CY97 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ssu72Q9CY97 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssu72Q9CY97 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ssu72Q9CY97 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ssu72Q9CY97 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ssu72Q9CY97 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.52■□□□□ 0.71
Ssu72Q9CY97 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Ssu72Q9CY97 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.51■□□□□ 0.71
Ssu72Q9CY97 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssu72Q9CY97 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ssu72Q9CY97 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssu72Q9CY97 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssu72Q9CY97 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ssu72Q9CY97 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssu72Q9CY97 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssu72Q9CY97 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Ssu72Q9CY97 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.51■□□□□ 0.71
Ssu72Q9CY97 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Ssu72Q9CY97 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ssu72Q9CY97 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ssu72Q9CY97 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ssu72Q9CY97 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ssu72Q9CY97 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ssu72Q9CY97 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ssu72Q9CY97 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ssu72Q9CY97 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ssu72Q9CY97 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ssu72Q9CY97 BC021767-201ENSMUST00000126387 1716 ntBASIC19.5■□□□□ 0.71
Ssu72Q9CY97 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.5■□□□□ 0.71
Ssu72Q9CY97 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.5■□□□□ 0.71
Ssu72Q9CY97 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ssu72Q9CY97 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ssu72Q9CY97 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ssu72Q9CY97 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ssu72Q9CY97 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
Ssu72Q9CY97 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Ssu72Q9CY97 Gm10232-201ENSMUST00000089221 720 ntBASIC19.49■□□□□ 0.71
Ssu72Q9CY97 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ssu72Q9CY97 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ssu72Q9CY97 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ssu72Q9CY97 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Ssu72Q9CY97 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ssu72Q9CY97 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ssu72Q9CY97 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ssu72Q9CY97 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ssu72Q9CY97 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ssu72Q9CY97 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ssu72Q9CY97 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ssu72Q9CY97 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ssu72Q9CY97 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Ssu72Q9CY97 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ssu72Q9CY97 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Ssu72Q9CY97 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ssu72Q9CY97 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ssu72Q9CY97 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ssu72Q9CY97 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ssu72Q9CY97 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ssu72Q9CY97 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.47■□□□□ 0.71
Ssu72Q9CY97 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.47■□□□□ 0.71
Ssu72Q9CY97 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ssu72Q9CY97 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.47■□□□□ 0.71
Ssu72Q9CY97 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ssu72Q9CY97 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ssu72Q9CY97 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ssu72Q9CY97 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ssu72Q9CY97 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ssu72Q9CY97 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ssu72Q9CY97 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ssu72Q9CY97 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ssu72Q9CY97 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ssu72Q9CY97 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ssu72Q9CY97 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms