Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf135Q9CWS1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
Rnf135Q9CWS1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf135Q9CWS1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.42■□□□□ 0.86
Rnf135Q9CWS1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.42■□□□□ 0.86
Rnf135Q9CWS1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf135Q9CWS1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf135Q9CWS1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf135Q9CWS1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rnf135Q9CWS1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf135Q9CWS1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf135Q9CWS1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.41■□□□□ 0.86
Rnf135Q9CWS1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.41■□□□□ 0.86
Rnf135Q9CWS1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf135Q9CWS1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Rnf135Q9CWS1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf135Q9CWS1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf135Q9CWS1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf135Q9CWS1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf135Q9CWS1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.41■□□□□ 0.86
Rnf135Q9CWS1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf135Q9CWS1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
Rnf135Q9CWS1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf135Q9CWS1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf135Q9CWS1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf135Q9CWS1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf135Q9CWS1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf135Q9CWS1 Gm27454-201ENSMUST00000185090 204 ntBASIC20.39■□□□□ 0.85
Rnf135Q9CWS1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.39■□□□□ 0.85
Rnf135Q9CWS1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf135Q9CWS1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf135Q9CWS1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf135Q9CWS1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Rnf135Q9CWS1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf135Q9CWS1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf135Q9CWS1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf135Q9CWS1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf135Q9CWS1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf135Q9CWS1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.38■□□□□ 0.85
Rnf135Q9CWS1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf135Q9CWS1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.38■□□□□ 0.85
Rnf135Q9CWS1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf135Q9CWS1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf135Q9CWS1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf135Q9CWS1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.38■□□□□ 0.85
Rnf135Q9CWS1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf135Q9CWS1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.38■□□□□ 0.85
Rnf135Q9CWS1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf135Q9CWS1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Rnf135Q9CWS1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf135Q9CWS1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.37■□□□□ 0.85
Rnf135Q9CWS1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf135Q9CWS1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf135Q9CWS1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.37■□□□□ 0.85
Rnf135Q9CWS1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.37■□□□□ 0.85
Rnf135Q9CWS1 Golgb1-201ENSMUST00000023534 498 ntBASIC20.37■□□□□ 0.85
Rnf135Q9CWS1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Rnf135Q9CWS1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Rnf135Q9CWS1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf135Q9CWS1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.37■□□□□ 0.85
Rnf135Q9CWS1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf135Q9CWS1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf135Q9CWS1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf135Q9CWS1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf135Q9CWS1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf135Q9CWS1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.36■□□□□ 0.85
Rnf135Q9CWS1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf135Q9CWS1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf135Q9CWS1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf135Q9CWS1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf135Q9CWS1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Rnf135Q9CWS1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf135Q9CWS1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.35■□□□□ 0.85
Rnf135Q9CWS1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf135Q9CWS1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf135Q9CWS1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Rnf135Q9CWS1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.35■□□□□ 0.85
Rnf135Q9CWS1 Gm45417-201ENSMUST00000209533 758 ntBASIC20.35■□□□□ 0.85
Rnf135Q9CWS1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rnf135Q9CWS1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Rnf135Q9CWS1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf135Q9CWS1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf135Q9CWS1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf135Q9CWS1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.34■□□□□ 0.85
Rnf135Q9CWS1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf135Q9CWS1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Rnf135Q9CWS1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf135Q9CWS1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf135Q9CWS1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf135Q9CWS1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf135Q9CWS1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf135Q9CWS1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf135Q9CWS1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.33■□□□□ 0.85
Rnf135Q9CWS1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf135Q9CWS1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
Rnf135Q9CWS1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf135Q9CWS1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf135Q9CWS1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf135Q9CWS1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf135Q9CWS1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms