Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39lQ9CQD0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39lQ9CQD0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rpl39lQ9CQD0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39lQ9CQD0 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.82□□□□□ -0.36
Rpl39lQ9CQD0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39lQ9CQD0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39lQ9CQD0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39lQ9CQD0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39lQ9CQD0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39lQ9CQD0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39lQ9CQD0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl39lQ9CQD0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Gm43909-201ENSMUST00000203443 1876 ntBASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rpl39lQ9CQD0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39lQ9CQD0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39lQ9CQD0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39lQ9CQD0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39lQ9CQD0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39lQ9CQD0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Rpl39lQ9CQD0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39lQ9CQD0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rpl39lQ9CQD0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39lQ9CQD0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rpl39lQ9CQD0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39lQ9CQD0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39lQ9CQD0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39lQ9CQD0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39lQ9CQD0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Rpl39lQ9CQD0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39lQ9CQD0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39lQ9CQD0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC12.79□□□□□ -0.36
Rpl39lQ9CQD0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39lQ9CQD0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39lQ9CQD0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39lQ9CQD0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39lQ9CQD0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Rpl39lQ9CQD0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39lQ9CQD0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39lQ9CQD0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39lQ9CQD0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39lQ9CQD0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39lQ9CQD0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39lQ9CQD0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39lQ9CQD0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39lQ9CQD0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39lQ9CQD0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39lQ9CQD0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39lQ9CQD0 Gm38342-201ENSMUST00000195710 2980 ntBASIC12.78□□□□□ -0.36
Rpl39lQ9CQD0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39lQ9CQD0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39lQ9CQD0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rpl39lQ9CQD0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC12.78□□□□□ -0.36
Rpl39lQ9CQD0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC12.78□□□□□ -0.36
Rpl39lQ9CQD0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39lQ9CQD0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39lQ9CQD0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39lQ9CQD0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rpl39lQ9CQD0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39lQ9CQD0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rpl39lQ9CQD0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39lQ9CQD0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39lQ9CQD0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39lQ9CQD0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpl39lQ9CQD0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpl39lQ9CQD0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpl39lQ9CQD0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rpl39lQ9CQD0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpl39lQ9CQD0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpl39lQ9CQD0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpl39lQ9CQD0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rpl39lQ9CQD0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpl39lQ9CQD0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC12.77□□□□□ -0.36
Rpl39lQ9CQD0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpl39lQ9CQD0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl39lQ9CQD0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC12.77□□□□□ -0.37
Rpl39lQ9CQD0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC12.77□□□□□ -0.37
Rpl39lQ9CQD0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl39lQ9CQD0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl39lQ9CQD0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl39lQ9CQD0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl39lQ9CQD0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms