Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpa3Q9CQ71 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rpa3Q9CQ71 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.72■□□□□ 0.91
Rpa3Q9CQ71 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpa3Q9CQ71 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rpa3Q9CQ71 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpa3Q9CQ71 Spcs1-204ENSMUST00000226782 949 ntBASIC20.72■□□□□ 0.91
Rpa3Q9CQ71 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Rpa3Q9CQ71 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpa3Q9CQ71 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rpa3Q9CQ71 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpa3Q9CQ71 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rpa3Q9CQ71 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpa3Q9CQ71 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpa3Q9CQ71 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpa3Q9CQ71 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rpa3Q9CQ71 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.71■□□□□ 0.91
Rpa3Q9CQ71 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpa3Q9CQ71 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpa3Q9CQ71 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpa3Q9CQ71 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpa3Q9CQ71 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpa3Q9CQ71 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rpa3Q9CQ71 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpa3Q9CQ71 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpa3Q9CQ71 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpa3Q9CQ71 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpa3Q9CQ71 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Rpa3Q9CQ71 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpa3Q9CQ71 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.7■□□□□ 0.9
Rpa3Q9CQ71 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpa3Q9CQ71 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpa3Q9CQ71 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rpa3Q9CQ71 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpa3Q9CQ71 Mir7075-201ENSMUST00000184187 82 ntBASIC20.7■□□□□ 0.9
Rpa3Q9CQ71 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Rpa3Q9CQ71 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.7■□□□□ 0.9
Rpa3Q9CQ71 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpa3Q9CQ71 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpa3Q9CQ71 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa3Q9CQ71 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa3Q9CQ71 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rpa3Q9CQ71 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Rpa3Q9CQ71 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa3Q9CQ71 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa3Q9CQ71 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa3Q9CQ71 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.69■□□□□ 0.9
Rpa3Q9CQ71 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa3Q9CQ71 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa3Q9CQ71 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa3Q9CQ71 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa3Q9CQ71 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa3Q9CQ71 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.69■□□□□ 0.9
Rpa3Q9CQ71 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa3Q9CQ71 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rpa3Q9CQ71 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rpa3Q9CQ71 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Rpa3Q9CQ71 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Rpa3Q9CQ71 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpa3Q9CQ71 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Rpa3Q9CQ71 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.68■□□□□ 0.9
Rpa3Q9CQ71 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpa3Q9CQ71 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpa3Q9CQ71 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.68■□□□□ 0.9
Rpa3Q9CQ71 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rpa3Q9CQ71 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.68■□□□□ 0.9
Rpa3Q9CQ71 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpa3Q9CQ71 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpa3Q9CQ71 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpa3Q9CQ71 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpa3Q9CQ71 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Rpa3Q9CQ71 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpa3Q9CQ71 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Rpa3Q9CQ71 Gm45417-201ENSMUST00000209533 758 ntBASIC20.67■□□□□ 0.9
Rpa3Q9CQ71 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.67■□□□□ 0.9
Rpa3Q9CQ71 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpa3Q9CQ71 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpa3Q9CQ71 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpa3Q9CQ71 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpa3Q9CQ71 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpa3Q9CQ71 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpa3Q9CQ71 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.66■□□□□ 0.9
Rpa3Q9CQ71 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa3Q9CQ71 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa3Q9CQ71 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa3Q9CQ71 Gm12251-201ENSMUST00000117893 792 ntBASIC20.66■□□□□ 0.9
Rpa3Q9CQ71 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.66■□□□□ 0.9
Rpa3Q9CQ71 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa3Q9CQ71 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa3Q9CQ71 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa3Q9CQ71 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa3Q9CQ71 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa3Q9CQ71 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa3Q9CQ71 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa3Q9CQ71 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa3Q9CQ71 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa3Q9CQ71 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa3Q9CQ71 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rpa3Q9CQ71 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa3Q9CQ71 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms