Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SncaipQ99ME3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SncaipQ99ME3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SncaipQ99ME3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SncaipQ99ME3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SncaipQ99ME3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SncaipQ99ME3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SncaipQ99ME3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SncaipQ99ME3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SncaipQ99ME3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.31■□□□□ 0.84
SncaipQ99ME3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SncaipQ99ME3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.31■□□□□ 0.84
SncaipQ99ME3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SncaipQ99ME3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SncaipQ99ME3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SncaipQ99ME3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SncaipQ99ME3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SncaipQ99ME3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SncaipQ99ME3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SncaipQ99ME3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SncaipQ99ME3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SncaipQ99ME3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.3■□□□□ 0.84
SncaipQ99ME3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SncaipQ99ME3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SncaipQ99ME3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SncaipQ99ME3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SncaipQ99ME3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SncaipQ99ME3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SncaipQ99ME3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SncaipQ99ME3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.29■□□□□ 0.84
SncaipQ99ME3 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.29■□□□□ 0.84
SncaipQ99ME3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SncaipQ99ME3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SncaipQ99ME3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SncaipQ99ME3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.28■□□□□ 0.84
SncaipQ99ME3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SncaipQ99ME3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SncaipQ99ME3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SncaipQ99ME3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SncaipQ99ME3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SncaipQ99ME3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SncaipQ99ME3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SncaipQ99ME3 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.27■□□□□ 0.84
SncaipQ99ME3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SncaipQ99ME3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SncaipQ99ME3 Gm12251-201ENSMUST00000117893 792 ntBASIC20.27■□□□□ 0.84
SncaipQ99ME3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SncaipQ99ME3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SncaipQ99ME3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SncaipQ99ME3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SncaipQ99ME3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SncaipQ99ME3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SncaipQ99ME3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SncaipQ99ME3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SncaipQ99ME3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.26■□□□□ 0.83
SncaipQ99ME3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SncaipQ99ME3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SncaipQ99ME3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
SncaipQ99ME3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SncaipQ99ME3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.25■□□□□ 0.83
SncaipQ99ME3 Gm27454-201ENSMUST00000185090 204 ntBASIC20.25■□□□□ 0.83
SncaipQ99ME3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SncaipQ99ME3 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.25■□□□□ 0.83
SncaipQ99ME3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SncaipQ99ME3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SncaipQ99ME3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SncaipQ99ME3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SncaipQ99ME3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SncaipQ99ME3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SncaipQ99ME3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SncaipQ99ME3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SncaipQ99ME3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SncaipQ99ME3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SncaipQ99ME3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SncaipQ99ME3 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.23■□□□□ 0.83
SncaipQ99ME3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
SncaipQ99ME3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SncaipQ99ME3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SncaipQ99ME3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SncaipQ99ME3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SncaipQ99ME3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SncaipQ99ME3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SncaipQ99ME3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
SncaipQ99ME3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SncaipQ99ME3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.22■□□□□ 0.83
SncaipQ99ME3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SncaipQ99ME3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SncaipQ99ME3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.22■□□□□ 0.83
SncaipQ99ME3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SncaipQ99ME3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SncaipQ99ME3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SncaipQ99ME3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SncaipQ99ME3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
SncaipQ99ME3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SncaipQ99ME3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SncaipQ99ME3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SncaipQ99ME3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SncaipQ99ME3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SncaipQ99ME3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SncaipQ99ME3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms