Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdk9Q99J95 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cdk9Q99J95 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.68■□□□□ 0.74
Cdk9Q99J95 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdk9Q99J95 Rarb-207ENSMUST00000225921 2756 ntBASIC19.68■□□□□ 0.74
Cdk9Q99J95 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdk9Q99J95 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.68■□□□□ 0.74
Cdk9Q99J95 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdk9Q99J95 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdk9Q99J95 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdk9Q99J95 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdk9Q99J95 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdk9Q99J95 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdk9Q99J95 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.67■□□□□ 0.74
Cdk9Q99J95 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Cdk9Q99J95 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Cdk9Q99J95 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdk9Q99J95 Gm43566-201ENSMUST00000196851 808 ntBASIC19.67■□□□□ 0.74
Cdk9Q99J95 Gm5812-201ENSMUST00000061073 957 ntBASIC19.67■□□□□ 0.74
Cdk9Q99J95 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cdk9Q99J95 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdk9Q99J95 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdk9Q99J95 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdk9Q99J95 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdk9Q99J95 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk9Q99J95 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk9Q99J95 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk9Q99J95 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.66■□□□□ 0.74
Cdk9Q99J95 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk9Q99J95 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Cdk9Q99J95 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cdk9Q99J95 Gm13238-201ENSMUST00000117655 780 ntBASIC19.66■□□□□ 0.74
Cdk9Q99J95 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.66■□□□□ 0.74
Cdk9Q99J95 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Cdk9Q99J95 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cdk9Q99J95 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk9Q99J95 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.66■□□□□ 0.74
Cdk9Q99J95 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk9Q99J95 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.66■□□□□ 0.74
Cdk9Q99J95 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk9Q99J95 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk9Q99J95 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk9Q99J95 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk9Q99J95 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Cdk9Q99J95 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk9Q99J95 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk9Q99J95 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cdk9Q99J95 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk9Q99J95 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk9Q99J95 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk9Q99J95 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.65■□□□□ 0.74
Cdk9Q99J95 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk9Q99J95 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk9Q99J95 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk9Q99J95 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk9Q99J95 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk9Q99J95 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk9Q99J95 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk9Q99J95 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.65■□□□□ 0.74
Cdk9Q99J95 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cdk9Q99J95 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cdk9Q99J95 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Cdk9Q99J95 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdk9Q99J95 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
Cdk9Q99J95 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cdk9Q99J95 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdk9Q99J95 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdk9Q99J95 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cdk9Q99J95 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdk9Q99J95 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.64■□□□□ 0.73
Cdk9Q99J95 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdk9Q99J95 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Cdk9Q99J95 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdk9Q99J95 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdk9Q99J95 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdk9Q99J95 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdk9Q99J95 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.63■□□□□ 0.73
Cdk9Q99J95 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdk9Q99J95 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk9Q99J95 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk9Q99J95 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk9Q99J95 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk9Q99J95 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
Cdk9Q99J95 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk9Q99J95 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk9Q99J95 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk9Q99J95 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk9Q99J95 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cdk9Q99J95 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk9Q99J95 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cdk9Q99J95 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
Cdk9Q99J95 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk9Q99J95 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.61■□□□□ 0.73
Cdk9Q99J95 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk9Q99J95 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk9Q99J95 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk9Q99J95 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.61■□□□□ 0.73
Cdk9Q99J95 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk9Q99J95 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.6■□□□□ 0.73
Cdk9Q99J95 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms