Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC22.71■■□□□ 1.23
Rfc4Q99J62 Nespas-201ENSMUST00000143738 1083 ntBASIC22.71■■□□□ 1.23
Rfc4Q99J62 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rfc4Q99J62 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rfc4Q99J62 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Rfc4Q99J62 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Rfc4Q99J62 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rfc4Q99J62 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rfc4Q99J62 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
Rfc4Q99J62 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Rfc4Q99J62 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.7■■□□□ 1.22
Rfc4Q99J62 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rfc4Q99J62 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Rfc4Q99J62 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rfc4Q99J62 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rfc4Q99J62 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rfc4Q99J62 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rfc4Q99J62 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rfc4Q99J62 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rfc4Q99J62 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rfc4Q99J62 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rfc4Q99J62 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rfc4Q99J62 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.69■■□□□ 1.22
Rfc4Q99J62 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Rfc4Q99J62 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Rfc4Q99J62 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Rfc4Q99J62 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
Rfc4Q99J62 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Rfc4Q99J62 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rfc4Q99J62 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rfc4Q99J62 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.69■■□□□ 1.22
Rfc4Q99J62 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rfc4Q99J62 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Rfc4Q99J62 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rfc4Q99J62 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.68■■□□□ 1.22
Rfc4Q99J62 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rfc4Q99J62 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC22.68■■□□□ 1.22
Rfc4Q99J62 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Rfc4Q99J62 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rfc4Q99J62 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rfc4Q99J62 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rfc4Q99J62 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rfc4Q99J62 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.67■■□□□ 1.22
Rfc4Q99J62 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.67■■□□□ 1.22
Rfc4Q99J62 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rfc4Q99J62 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.67■■□□□ 1.22
Rfc4Q99J62 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Rfc4Q99J62 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rfc4Q99J62 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rfc4Q99J62 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rfc4Q99J62 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC22.66■■□□□ 1.22
Rfc4Q99J62 Gm3807-201ENSMUST00000193520 1168 ntBASIC22.66■■□□□ 1.22
Rfc4Q99J62 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Rfc4Q99J62 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rfc4Q99J62 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rfc4Q99J62 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Rfc4Q99J62 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rfc4Q99J62 Gm10653-202ENSMUST00000139570 835 ntBASIC22.65■■□□□ 1.22
Rfc4Q99J62 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rfc4Q99J62 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rfc4Q99J62 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rfc4Q99J62 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rfc4Q99J62 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rfc4Q99J62 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rfc4Q99J62 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rfc4Q99J62 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rfc4Q99J62 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
Rfc4Q99J62 Gm4968-201ENSMUST00000071458 858 ntBASIC22.64■■□□□ 1.21
Rfc4Q99J62 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC22.64■■□□□ 1.21
Rfc4Q99J62 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rfc4Q99J62 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC22.63■■□□□ 1.21
Rfc4Q99J62 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rfc4Q99J62 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rfc4Q99J62 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC22.63■■□□□ 1.21
Rfc4Q99J62 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.63■■□□□ 1.21
Rfc4Q99J62 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rfc4Q99J62 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rfc4Q99J62 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rfc4Q99J62 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Rfc4Q99J62 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rfc4Q99J62 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rfc4Q99J62 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Rfc4Q99J62 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Rfc4Q99J62 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rfc4Q99J62 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Rfc4Q99J62 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.62■■□□□ 1.21
Rfc4Q99J62 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rfc4Q99J62 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rfc4Q99J62 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rfc4Q99J62 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rfc4Q99J62 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Rfc4Q99J62 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rfc4Q99J62 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rfc4Q99J62 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rfc4Q99J62 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rfc4Q99J62 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Rfc4Q99J62 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rfc4Q99J62 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rfc4Q99J62 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Rfc4Q99J62 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms