Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd1Q99J36 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd1Q99J36 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.48■□□□□ 0.39
Thumpd1Q99J36 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Thumpd1Q99J36 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Thumpd1Q99J36 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Thumpd1Q99J36 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Thumpd1Q99J36 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thumpd1Q99J36 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thumpd1Q99J36 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thumpd1Q99J36 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thumpd1Q99J36 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.47■□□□□ 0.39
Thumpd1Q99J36 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Thumpd1Q99J36 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Thumpd1Q99J36 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Thumpd1Q99J36 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Thumpd1Q99J36 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Thumpd1Q99J36 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Thumpd1Q99J36 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Thumpd1Q99J36 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.46■□□□□ 0.39
Thumpd1Q99J36 Gm43566-201ENSMUST00000196851 808 ntBASIC17.46■□□□□ 0.39
Thumpd1Q99J36 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Thumpd1Q99J36 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Thumpd1Q99J36 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.46■□□□□ 0.39
Thumpd1Q99J36 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Thumpd1Q99J36 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Thumpd1Q99J36 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Thumpd1Q99J36 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thumpd1Q99J36 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thumpd1Q99J36 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.45■□□□□ 0.38
Thumpd1Q99J36 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thumpd1Q99J36 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thumpd1Q99J36 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thumpd1Q99J36 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Thumpd1Q99J36 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thumpd1Q99J36 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.45■□□□□ 0.38
Thumpd1Q99J36 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.45■□□□□ 0.38
Thumpd1Q99J36 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.45■□□□□ 0.38
Thumpd1Q99J36 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thumpd1Q99J36 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Thumpd1Q99J36 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Thumpd1Q99J36 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thumpd1Q99J36 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thumpd1Q99J36 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Thumpd1Q99J36 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.45■□□□□ 0.38
Thumpd1Q99J36 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Thumpd1Q99J36 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thumpd1Q99J36 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Thumpd1Q99J36 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Thumpd1Q99J36 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Thumpd1Q99J36 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Thumpd1Q99J36 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Thumpd1Q99J36 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Thumpd1Q99J36 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Thumpd1Q99J36 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.44■□□□□ 0.38
Thumpd1Q99J36 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.44■□□□□ 0.38
Thumpd1Q99J36 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Thumpd1Q99J36 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Thumpd1Q99J36 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Thumpd1Q99J36 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Thumpd1Q99J36 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.43■□□□□ 0.38
Thumpd1Q99J36 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Thumpd1Q99J36 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Thumpd1Q99J36 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Thumpd1Q99J36 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Thumpd1Q99J36 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Thumpd1Q99J36 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.43■□□□□ 0.38
Thumpd1Q99J36 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.43■□□□□ 0.38
Thumpd1Q99J36 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Thumpd1Q99J36 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Thumpd1Q99J36 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Thumpd1Q99J36 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Thumpd1Q99J36 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Thumpd1Q99J36 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Thumpd1Q99J36 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.42■□□□□ 0.38
Thumpd1Q99J36 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd1Q99J36 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd1Q99J36 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd1Q99J36 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd1Q99J36 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd1Q99J36 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd1Q99J36 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd1Q99J36 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd1Q99J36 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd1Q99J36 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Thumpd1Q99J36 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Thumpd1Q99J36 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd1Q99J36 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd1Q99J36 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd1Q99J36 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd1Q99J36 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Thumpd1Q99J36 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Thumpd1Q99J36 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.41■□□□□ 0.38
Thumpd1Q99J36 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd1Q99J36 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd1Q99J36 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.41■□□□□ 0.38
Thumpd1Q99J36 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.41■□□□□ 0.38
Thumpd1Q99J36 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd1Q99J36 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd1Q99J36 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms