Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha1Q91Y21 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha1Q91Y21 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha1Q91Y21 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdha1Q91Y21 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pcdha1Q91Y21 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha1Q91Y21 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.52■□□□□ 0.88
Pcdha1Q91Y21 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.52■□□□□ 0.88
Pcdha1Q91Y21 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha1Q91Y21 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha1Q91Y21 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
Pcdha1Q91Y21 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.52■□□□□ 0.88
Pcdha1Q91Y21 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Pcdha1Q91Y21 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdha1Q91Y21 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdha1Q91Y21 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Pcdha1Q91Y21 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha1Q91Y21 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha1Q91Y21 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha1Q91Y21 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Pcdha1Q91Y21 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Pcdha1Q91Y21 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha1Q91Y21 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcdha1Q91Y21 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcdha1Q91Y21 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha1Q91Y21 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha1Q91Y21 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Pcdha1Q91Y21 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha1Q91Y21 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.5■□□□□ 0.87
Pcdha1Q91Y21 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha1Q91Y21 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha1Q91Y21 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdha1Q91Y21 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.5■□□□□ 0.87
Pcdha1Q91Y21 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha1Q91Y21 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha1Q91Y21 Gm11421-201ENSMUST00000122124 294 ntBASIC20.49■□□□□ 0.87
Pcdha1Q91Y21 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha1Q91Y21 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha1Q91Y21 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdha1Q91Y21 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pcdha1Q91Y21 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha1Q91Y21 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha1Q91Y21 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha1Q91Y21 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.48■□□□□ 0.87
Pcdha1Q91Y21 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha1Q91Y21 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha1Q91Y21 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha1Q91Y21 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
Pcdha1Q91Y21 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha1Q91Y21 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha1Q91Y21 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha1Q91Y21 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha1Q91Y21 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha1Q91Y21 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha1Q91Y21 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha1Q91Y21 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha1Q91Y21 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.47■□□□□ 0.87
Pcdha1Q91Y21 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.47■□□□□ 0.87
Pcdha1Q91Y21 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.47■□□□□ 0.87
Pcdha1Q91Y21 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha1Q91Y21 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha1Q91Y21 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha1Q91Y21 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha1Q91Y21 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha1Q91Y21 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha1Q91Y21 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha1Q91Y21 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha1Q91Y21 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pcdha1Q91Y21 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha1Q91Y21 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha1Q91Y21 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha1Q91Y21 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha1Q91Y21 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha1Q91Y21 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha1Q91Y21 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdha1Q91Y21 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdha1Q91Y21 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdha1Q91Y21 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha1Q91Y21 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha1Q91Y21 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha1Q91Y21 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdha1Q91Y21 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.44■□□□□ 0.86
Pcdha1Q91Y21 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha1Q91Y21 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha1Q91Y21 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha1Q91Y21 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha1Q91Y21 Gm26571-201ENSMUST00000181399 666 ntBASIC20.44■□□□□ 0.86
Pcdha1Q91Y21 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.44■□□□□ 0.86
Pcdha1Q91Y21 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha1Q91Y21 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha1Q91Y21 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha1Q91Y21 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pcdha1Q91Y21 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha1Q91Y21 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdha1Q91Y21 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha1Q91Y21 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha1Q91Y21 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha1Q91Y21 Gm42642-201ENSMUST00000200683 355 ntBASIC20.43■□□□□ 0.86
Pcdha1Q91Y21 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pcdha1Q91Y21 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms